Gene detail

Detailed information of ENSCIQP00000017448.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: CAA57211.1, hox1 [Podocoryna carnea]
Species Millepora alcicornis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P81192	Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=187800 GN=HOXA4 PE=3 SV=1
Q28598	Homeobox protein Hox-A4 (Fragment) OS=Ovis aries OX=9940 GN=HOXA4 PE=2 SV=1
P15859	Homeobox protein H55 (Fragment) OS=Apis mellifera OX=7460 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000082 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046 all species →	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020479 all species →	Domain	Homeobox domain, metazoa	Interproscan
IPR001356 all species →	Domain	Homeobox domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR046327 all species →	Family	Homeobox protein Hox-A1/B1/D1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45946 all species →	HOMEOBOX PROTEIN ROUGH-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000017448.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.