Gene detail

Detailed information of ENSCIQP00000017616.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_020915618.1, DNA-directed RNA polymerase II subunit RPB3 [Exaiptasia diaphana]
Species abbreviation MALCI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3T0Q3	DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus OX=9913 GN=POLR2C PE=1 SV=1
P19387	DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens OX=9606 GN=POLR2C PE=1 SV=2
P97760	DNA-directed RNA polymerase II subunit RPB3 OS=Mus musculus OX=10090 GN=Polr2c PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007832 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01193 all species →	RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain	Domain	Interproscan
PF01000 all species →	RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011263 all species →	Domain	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	Interproscan
IPR011262 all species →	Domain	DNA-directed RNA polymerase, insert domain	Interproscan
IPR036603 all species →	Homologous_superfamily	RNA polymerase, RBP11-like subunit	Interproscan
IPR050518 all species →	Family	Archaeal Rpo3/Eukaryotic RPB3 RNA Polymerase Subunit	Interproscan
IPR036643 all species →	Homologous_superfamily	DNA-directed RNA polymerase, insert domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11800 all species →	DNA-DIRECTED RNA POLYMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003899 all species →	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0001055 all species →	Molecular Function	RNA polymerase II activity	Interproscan
GO:0005665 all species →	Cellular Component	RNA polymerase II, core complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000017616.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.