Gene detail

Detailed information of ENSCIQP00000019487.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_002160302.3, alanine--tRNA ligase, cytoplasmic [Hydra vulgaris]
Species abbreviation MALCI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BGQ7	Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1
Q8CFX8	Alanine--tRNA ligase, cytoplasmic OS=Mesocricetus auratus OX=10036 GN=Aars1 PE=2 SV=1
P49588	Alanine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=AARS1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002669 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07973 all species →	tRNA_SAD	Threonyl and Alanyl tRNA synthetase second additional domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018163 all species →	Homologous_superfamily	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily	Interproscan
IPR012947 all species →	Domain	Threonyl/alanyl tRNA synthetase, SAD	Interproscan
IPR018165 all species →	Domain	Alanyl-tRNA synthetase, class IIc, core domain	Interproscan
IPR050058 all species →	Family	Alanine--tRNA ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11777 all species →	ALANYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0004812 all species →	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0043039 all species →	Biological Process	tRNA aminoacylation	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004813 all species →	Molecular Function	alanine-tRNA ligase activity	Interproscan
GO:0006419 all species →	Biological Process	alanyl-tRNA aminoacylation	Interproscan
GO:0002161 all species →	Molecular Function	aminoacyl-tRNA editing activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000019487.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.