Detailed information of ENSCIQP00000021907.1 in Millepora alcicornis

Genomic Location: chr6:17918301...17957312
NR annotation: XP_047133699.1, nonsense-mediated mRNA decay factor SMG8 [Hydra vulgaris]
Species Millepora alcicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0VA04Nonsense-mediated mRNA decay factor SMG8 OS=Xenopus tropicalis OX=8364 GN=smg8 PE=2 SV=1
B0W730Nonsense-mediated mRNA decay factor SMG8 OS=Culex quinquefasciatus OX=7176 GN=CPIJ003128 PE=3 SV=1
A1A4J7Nonsense-mediated mRNA decay factor SMG8 OS=Bos taurus OX=9913 GN=SMG8 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005093 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10220
all species →		Smg8_Smg9Smg8_Smg9 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019354
all species →		FamilyNonsense-mediated mRNA decay factor SMG8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13091
all species →		AMPLIFIED IN BREAST CANCER 2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000184
all species →		Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18734SMG8; protein SMG8-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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