Gene detail

Detailed information of ENSCIQP00000022405.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: XP_047141672.1, paxillin isoform X2 [Hydra vulgaris]
Species Millepora alcicornis · all data for this species · gene families

Sequence

CDS

Transcript

ENSCIQT00000026203

GAATAATGATAATGCTTTTCctgagataattataaaataacctCAAATTCAGCAAATTTCTGTCGCGATAATGGAAGACTTAGATGCGCTATTGGCAGACTTACAGAATACATCACTTCAAAGAAGTACAGCAAAATCCCAAGCAAATAACAATGACTTCCCACCACCTCCGCCAGgACTAACCAATGGGGACCAAAATCATGATGGAGGAGGCACGGTACAAGTCAGTATGGGAGCCGttGAAGCATTGCTTGACGAATTAGACAGCACGGTTTCTCATTCTAAAACAACAGTACAAGCACGACCTGCTGCTGGACGTGCGACAATACAAGATCAACCGATGCCTAAAACAGCATCAACAGCAACGCGGGAACTCGACGAATTGATGGCATCCTTGTCAGACTTTAAAGTAAACATCCCAGCAGCAGGAGAACCACGAGGTGACAGTCCACCGCCATCAGACGACTATGCAAGAGTTGAAAAGCCAGTCAAAAAAGCTCCCCCAATCAAACAGAAACcgGCGCAACCACCGAAAAGTAGCCTCGATTCGATGTTAGGTAGTTTGCAAACAAATATGTCAAAGCAGGGGGTAACAACTGTAACAAAGGGTGTTTGTGCAGCTTGCAATAAACCAATAATCGGTCAAGTTTGTACAGCGTTGGGAAAAGCATGGCACCCAGAACATTTTACGTGCTGTATATGTGATACACAGTTAGGAACGAAAACGTTTTTCGAACGAGACGGGAAGCCCTATTGCGAAGCAGACTATCATGAGAAATTTGCACCAAAATGTTTCGCATGCAATGGACCAATATTAGACTCATGTGTTACGTCGATGGATCACACATGGCATCCGGAACATTTTGTTTGTCACGAGTGTCAAAGGCCGTTTGGGGATGCCGGTTTCCACGAAAAAGATGGGAAAGCTTATTGTCgggatgattatttcaaaatgtttgctCCTAAGTGCTCGGGTTGTGAGGAGGCAGTCATTGATAATTATATATCAGCGTTAAATGGGCATTGGCATCCTCAGTGCTTCGTTTGTATGGAGTGTCATCAACCTTTCCAAAATGGTAGCTTTTTCGAACACGAAGGAATGCCGTATTGTGAAATGCATTATCACGCACGAAGAGGATCACTGTGTTATAGTTGTCAAAAACCGATTACTGGGAGATGTATAACAGCTATGCATAGGAAGTTCCACCCGGAGCATTTTATATGCGCGTTTTGtttgaaacaattaaacaaaggaacctttaaagaacaaaatgataAACCATACTGTCATTcttgttttgtaaaattgtttggaTAGGTAAAGAAGAAGTTAACAGAAATTATCATTGAAATGGTGTGGCTACAATCTACCAAAGCAATGAAAAATGGAGCTATATAAATCTTAATATTGACCTCGAAAAGAATCAGTTCAATTCAAGGTAATGTCAATAGGTAATTTGTCAATacaaaaaggaagttttttattataaaagaaatccatgtttcatatattttttaagtaattctgtaaatgtaattaattttcagattttatgttatttctgtaatttttacttttgatatagtGATTTATCCAGATAAATACAGAAAGTGGAATCCTGTTATCGCTTGTATGTCTTGAAAGCTGTTGCTAACAAATCCAATAGTATCACCCGACATATCATCGAACAagcaaacaaattttcaaatttaacataaatggggcaaagtattcaagagtggaccaagtaaaattttttaaaggctgtcttccacaaattttatttggtccatttttgaatactttgtcccaaataataCTAGATTTTTGTGCTAAATATCGTTGAGGTTGGTCAGCtgtctttattgtcaaatttaaacTCAGCAGAATAGTAGGCGtgtctattgtttactttgagcgtGAGCCAACCCATCCTTTAACCCAtcaacgaccaatgttccccatcatatagaaaccagtcaattgatttgcaatgcaaatcaattgactggtttctatatgatggggaacagtggacgttaatgggttaaattcatattaaaaggttttaataaaacattgaaataaagtgttgaataaaacatttacaatcaagacaccagaatgatgtcaattGGCCGTTTTCTCccggcaaacatttacctgtttaaagtcaacaataggaattttagaaataaatgtgaAATACGATCTGAAATCCAGAGGTTATCTGCTATTTCAAAGAGACGctattctagtgtttctgttgtttactttgaacatatttcacttctttttctagtgttaatattgtaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P49023	Paxillin OS=Homo sapiens OX=9606 GN=PXN PE=1 SV=3
P49024	Paxillin OS=Gallus gallus OX=9031 GN=PXN PE=1 SV=1
Q66H76	Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004948 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03535 all species →	Paxillin	Paxillin family	Family	Interproscan
PF00412 all species →	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781 all species →	Domain	Zinc finger, LIM-type	Interproscan
IPR047075 all species →	Domain	Paxillin/TGFB1I1, LIM domain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24210 all species →	LIM DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSCIQP00000022405.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05760	PXN; paxillin	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.