Gene detail

Detailed information of ENSCIQP00000023588.1 in Millepora alcicornis

Genomic Location: chr9:121095222...121122184
NR annotation: XP_047142163.1, active breakpoint cluster region-related protein [Hydra vulgaris]
Species Millepora alcicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSCIQT00000027618

aaaattaataatcctCAAGAAATTCAACATGGACGAAGTAGGCAGAATAAGGAGAACAGAAAGTCAAAATCAgcaagtaaacaaaaacaaagtgtaCAATTATCAGATACTGATACAGCCGGACCTGTACGTAAATTTCGTCCTTCTAGAAATTTAACTCTGCCTATTAAACCCGTTCACTCAGACATGGCCTTAAATCGGGGATGTGTTAGTCAGGGAAATACGCCTGTTAAAGGCCTTAACAGAACTTTATCTGCTGATGCTAAACAAACtcctaagaaacaaaaaattggtttttctcgAATACCGTCTTTATATTCTCCTAAAAAATCAGATTATGTTCAGCAGTTATATGGTCGTTTACCTTTGGAGAGAAATTTGTCAGAGGAATTAATCTTGTCTCGTAAATCAATAGACGAAACCTCTTTACACTCAAATGATAATACACCTCTACATTCACCCAGATCTCAACATCGTAGAAGTCGATTCtttggatttaaaaaatcacCAACAAATTCCCCAAAGAAAACTTCTCCGCAAAAAATGAAAGGAGACCAAAACTTACCAAGAGAAGCAGATATTAGTAATATTTCAGACAAGGAATCGCTAACTGGTTATTTGTTCGTCAACATACATAATGGCAAAGGTTTTACCCGAAATTCtgACACGTATGTTGTTTTGGAAATGGATAGTTATGGTCATttcttcaaaaaagcaaaaacaaaaccgGCGCGTGGTCAAGATCCAGTTTGGGATGAGGCATTCGAATTTGAAATAGAGGCATGCAGTATATTACGATTAACTTGCTATAATAAATTACGTCTAATGGGCGATGACATGACTGGAAAAGTTGCCGTTAATCTTGTTCGTGAAAATCTACTGGATAATCGAAATCATACCCTGGGTGTATCATTGGACCGTGGTCAAGGGTGCATGAAAATATCAGTATCCTTTTCCACGTCCTTTGACGGAATTAAAAAGACCCCTTCAATAAGTGAAAGTGGAGTGTTTGGTGTACCAATATCAATTGTATGCAGaCGTGAAAAGGCAGATATACCGGTGTTAGTGCTAAACTGTATCAAAGAAATAGAGCGTAGAGGAATGGAAGAAGTTGGCATTTACAGGTTGTCAGGGGTCGCATCTGAGATACAACATCTGAAAAAACTATTCAATGAGCaGACGCAGAACGCTTTGTTAGCGTTATCATCAACAGATATACATGCTGTTGCTGGATTGATGAAATTATACTTGCGTGAATTACCCAAGTCATTGTTTACCAGTAAACTTTACAATAAATTCGTTGAAGGACTCAGTATAACAGATCCTGAAGAAAAAGAGTTGTACATGTGTGACGTTTTGCACCAGCTCCCTCGTTGTAACTTATTAACTACTTTGTACCTGTTTGAACATCTTCGGAAAGTGTCGCGCTTcgaggaacaaaataaaatgggTGTCAATAATCTTGCAACTGTTTTTGGACCAACAGTATTAAGACCTTCGACTTCATCTGTCGGtgacaaagaaaatgaaagaagttCATGTAATGTCGGAACTTTCGATATCAGAGCTTTAGACGTAATGTCACAAGTCggtatttttagatactttttatcGTTAAAAAATGAACGGACTGAGTTACCGACAAATGATCTCGTTTTACTGCGAAAAATAAACCCGGCTAAAGCCTTGGAGCTTGAAGAAAAACTAATGGAAACTGCTGAAGAATTTCTTATTTAAGTTAAATAGTATGATCAAGCATGGTGAAGGTGGCTACAACGATATGCAGTCTAGTACAGTCTATTTAGTCTCGTTAGAAGACATTATTAGAAGTGAATTGCGTTAAGCGGGTGCCGTCGTCGATACAATTTTGGGAcattagatagatatatagtgAAGCATTTCACATGAAATTACTTGACGAGAATGGCAAATATATTACGAAGAACACTGACTCCATTACCAAAAAGCATGTTCAATCAGAATAATAAACAGAAGTAGTcgtcgggaggtgttctgtagaaaagctcTTCTGTGAAACAATTACAATGGATTCCTCTGTTTTGCGACATTTTTCGGAACTTGTGTTCTGCAAAGTACctgcccagcaaacatttaccagCTCAAGGTCAAccatggaaacactagaaaaaggtgtgaaatatgttcaaagatatcaaagacatcagaacgatgtcattgacctcgttctggtgtctttattgttaacttttgaacatatttcacacctttctttagtgtttttattattgactctGAGCAAGTAAATAATTGCTGGGTGTGAACGGTTACCAACGAGTAAAGACATGCGAATATTAAGTAAAGCCATAAAAACGTGAACTTTGTGCAGGCTTAATGAAATAGGTTTTAGAACCTCGCCTATAATTTCCTCCGAGTAAATTTCATTTACTGAGATTACCCTTTGGTCagatatttgttcaaagtaagcaataaagataccaaaatattttggtttctttcttgttgactttgaacagatattcgCCTAATGTGAATGTCTTAATAGCTTGAGCATGTTTTTAATGTTCCGTTATTTGCGGGTGTGAGCATCAGAAACTGCTCATAACGATTTGTATGACATCACTTGATCAAATGTAATCCTCAGGCTACCAGTAGAATTTGAAGACCACCTGGAAATCTGGGTATCAGGTTGTATTTTACATGAATTACGCGTTATTTGAGTTTGTAGGCAAGTCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6QNS3	Active breakpoint cluster region-related protein OS=Bos taurus OX=9913 GN=ABR PE=2 SV=1
Q5SSL4	Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr PE=1 SV=1
A0A0G2JTR4	Active breakpoint cluster region-related protein OS=Rattus norvegicus OX=10116 GN=Abr PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003486 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR037769 all species →	Family	Abr/Bcr	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23182 all species →	BREAKPOINT CLUSTER REGION PROTEIN BCR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0043547 all species →	Biological Process	positive regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20655	SYDE; Rho GTPase-activating protein SYDE	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.