Gene detail

Detailed information of ENSCIQP00000023877.1 in Millepora alcicornis

Genomic Location: not available for this species
NR annotation: CAE7234100.1, TOP2A, partial [Symbiodinium natans]
Species abbreviation MALCI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P30182	DNA topoisomerase 2 OS=Arabidopsis thaliana OX=3702 GN=TOP2 PE=2 SV=2
O42131	DNA topoisomerase 2-beta OS=Gallus gallus OX=9031 GN=TOP2B PE=2 SV=1
Q64399	DNA topoisomerase 2-beta OS=Cricetulus longicaudatus OX=10030 GN=TOP2B PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002437 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00204 all species →	DNA_gyraseB	DNA gyrase B	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050634 all species →	Family	DNA Topoisomerase II Enzyme	Interproscan
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR013506 all species →	Domain	DNA topoisomerase, type IIA, subunit B, domain 2	Interproscan
IPR001241 all species →	Family	DNA topoisomerase, type IIA	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10169 all species →	DNA TOPOISOMERASE/GYRASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000712 all species →	Biological Process	resolution of meiotic recombination intermediates	Interproscan
GO:0000819 all species →	Biological Process	sister chromatid segregation	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003918 all species →	Molecular Function	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006265 all species →	Biological Process	DNA topological change	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSCIQP00000023877.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.