Gene detail

Detailed information of ENSDJXP00000006111.1 in Hydractinia echinata

Genomic Location: :...
NR annotation: XP_047131108.1, long-chain fatty acid transport protein 1 isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDJXT00000006977

TTATtctgtaaaataatattttgcagaacTAATTATCATGAAGTTCCTTCGCTTAAGGCTTAGGAGGGTAGCTTAAGaAGCATTAAGTGAAATACAAACGGAGTTGAAAGGTCTGGATTTCTTTTGTTACGGCCGGAGTGAGAAAATTCAATACGCGACAGATTTGCCTGGATTAATCGAGACAACGTGCACAAGTAATCCGCCGAGACCGGAAGGAATCTCTTTCTATGataaGTTGATATATATGTACACATCTGGAACAACAGGACTTCCAAAACCAGCAGTAATTCGACATACAAGGTTCTATTTTATGGTCAACGGAATGGCGAGTTCGTTTAACGTCACTCATCAGGATACAAATTATGTTGCTCTTCCTCTGTATCACTCCAACGGGGGAGTGGGAGGGATCGGAATGATGATATACCGCGGAACAACTGTGATCATCGCCAAAAAATTTTCGGCAAGCAGATTTTTTCAAGAATGTGCGTATCATGGTGCCACCATGTTCAACTACATCGGAGAAACGTGTCGCTATCTGCTTGCTCAACCACCTTCGAAATATGATAGAGCACACAGAATACGATTAGCTATAGGAAATGGGTTGAGACCACAGATATGGTCCGAATTCAAAGACCGATTTGGAATTGCTGCGATTGGTGAATGTTACGCATCTACTGAAGgTAATGCGAATATGATCAACATCGACAACAAAGAAGGCGCTGTTGGTTTCAATTCGGTTATTGCACCTGGTTTCTATCCAATACGCTTGATAAAGGTTGATCGCATGACTGGAGATATACAAAGAGATGACAACGGAATGGCAATCGCGTGTGAACCAGGTGAAGCCGGAGAGTTGGTAGGAAAAGTTCGAAGTGATCCTGTGCATCAATTTGATGGTTACGTGGATAAAGAATCGACCGATAAAAAGATTGTTAGCGATATTTTCAATAAGGGGGATTCCGCTTTTCGTTCTGGTGATATCCTTGTGCAAGACGAGTTTGGCTATTTTTACTTTCAAGACCGCGGTGGAGATACTTTTCGATGGAAGGGAGAGAACGTCGGCACGGCAGAAGTGGAAGCCGCCATTAGTCGGATTTTAAACATGATGGATGTTGTAGTGTACGGAGTGGAGATTCCAGGTATTGAAGGACGAGCCGGTATGGCTTGTATCGGAGATCCAGATTATAGAGTGGACTTAAATTATTTGCGTTGTGAGTTACTTAACAGAGTTCCCAACTATGCCAGACCGCAATTTGTAAGACTTTCCAGCGATCACATCGAACAAACTGAAacatttaaatacaaaaaagtgaAATTACGTGAAGAAGGATTCGATCCTCGAAAAGTGATCGATGATCGGTTGTATTATAACAACCAAAGGACTGGAAAATACGAAGTCTTGGATATATTAGCTTATCAAAGAATTATTGATCATAATATTAGGTTTTAATCACCTTCGCCGGCTGCCGTGCGGGTAGAATTACATCGTATCGAACCGAATGGCATCTCATgaaaatatacttttcgaaTCCTATACTTACTTAATCCTATATTTACACATCTCACCAACACTTACACTTTTTAGGAGGAGTTTTAAAAGGTATCACAAATTACAAAAGGAACAGAAGAAAGCTGGTGTATATTTGCGAAATGCAAGAGTGaattgtcaaaaatatttattacatcatccagaaattttttttcgctGGATGTTTTTTGCGCTATATAAATTACCTTAAGGGAAAAATATTGTTTGTGGAAGAAAAAATATGCCAAGTATGCGAATAGGAATTTGAGAATTGTGCGAAATATGGAATAATCATGCATGTAGCCATAAAGTGGAAATTTTTGCTGAATTTACAAGAAAATTGCAGAGAAGCCGAAAAGAAGGTatgcaaaacaaaaaatctCCATCCGTTTTGGcctaaaaatgcaaaatttaaGTCTGCGAATACATTAATTGCAAACATTAATTTGTGTTCTTTTTTTTCGCatcaatttttttccttaaGATATACTGTGCGAAAATCTTTGAAGAAATTCATTTACATTACGCGTAGACTAGCTTTGCTGCGCTCCAAGTATGAACCTTTGCTTAGTTTTCTTAGTCACTGAAAAGAAAGTGTATTTGCAAGTATG

Protein

Uniprot

Uniprot term	Description
Q60714	Long-chain fatty acid transport protein 1 OS=Mus musculus OX=10090 GN=Slc27a1 PE=1 SV=1
Q6PCB7	Long-chain fatty acid transport protein 1 OS=Homo sapiens OX=9606 GN=SLC27A1 PE=1 SV=1
P97849	Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00501	AMP-binding	AMP-binding enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000873	Domain	AMP-dependent synthetase/ligase domain	Interproscan
IPR045851	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan
IPR042099	Homologous_superfamily	ANL, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43107	LONG-CHAIN FATTY ACID TRANSPORT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004467	Molecular Function	long-chain fatty acid-CoA ligase activity	Interproscan
GO:0005324	Molecular Function	long-chain fatty acid transmembrane transporter activity	Interproscan