Detailed information of ENSDJXP00000007495.1 in Hydractinia echinata

Genomic Location: :...
NR annotation: XP_002156035.2, poly(U)-binding-splicing factor PUF60 isoform X4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R469Poly(U)-binding-splicing factor PUF60 OS=Pongo abelii OX=9601 GN=PUF60 PE=2 SV=1
Q9UHX1Poly(U)-binding-splicing factor PUF60 OS=Homo sapiens OX=9606 GN=PUF60 PE=1 SV=1
Q3UEB3Poly(U)-binding-splicing factor PUF60 OS=Mus musculus OX=10090 GN=Puf60 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051974FamilyPoly(U)-binding-splicing regulatorInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR034209DomainPUF60, RNA recognition motif 1Interproscan
IPR034211DomainPUF60, RNA recognition motif 2Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47330POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000380Biological Processalternative mRNA splicing, via spliceosomeInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006376Biological ProcessmRNA splice site recognitionInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12838PUF60; poly(U)-binding-splicing factor PUF60-Spliceosomeko03041deepkoala

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