Detailed information of ENSDJXP00000010910.1 in Hydractinia echinata

Genomic Location: :...
NR annotation: XP_002170117.4, probable E3 ubiquitin-protein ligase makorin-1 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5NU14Probable E3 ubiquitin-protein ligase makorin-1 OS=Takifugu rubripes OX=31033 GN=mkrn1 PE=2 SV=1
Q4SRI6Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon nigroviridis OX=99883 GN=mkrn1 PE=3 SV=1
Q6GLT5Probable E3 ubiquitin-protein ligase makorin-1 OS=Xenopus laevis OX=8355 GN=mkrn1 PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14608zf-CCCH_2RNA-binding, Nab2-type zinc fingerDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF18345zf_CCCH_4Zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR045072FamilyMKRN-likeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11224MAKORIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15687MKRN; E3 ubiquitin-protein ligase makorinEC:2.3.2.27
Ubiquitin systemko04121deepkoala

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