Gene detail

Detailed information of ENSDJXP00000024176.1 in Hydractinia echinata

Genomic Location: not available for this species
NR annotation: XP_047132824.1, U3 small nucleolar RNA-associated protein 25 homolog [Hydra vulgaris]
Species Hydractinia echinata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q642T7	U3 small nucleolar RNA-associated protein 25 homolog OS=Xenopus tropicalis OX=8364 GN=utp25 PE=2 SV=1
Q5ZLG3	U3 small nucleolar RNA-associated protein 25 homolog OS=Gallus gallus OX=9031 GN=UTP25 PE=2 SV=1
Q8BTT6	U3 small nucleolar RNA-associated protein 25 homolog OS=Mus musculus OX=10090 GN=Utp25 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002910 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06862 all species →	UTP25	Utp25, U3 small nucleolar RNA-associated SSU processome protein 25	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR010678 all species →	Family	U3 small nucleolar RNA-associated protein 25	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12933 all species →	ORF PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000462 all species →	Biological Process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0032040 all species →	Cellular Component	small-subunit processome	Interproscan
GO:0034511 all species →	Molecular Function	U3 snoRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDJXP00000024176.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.