Gene detail

Detailed information of ENSDJXP00000026213.1 in Hydractinia echinata

Genomic Location: :...
NR annotation: XP_047144410.1, GTP-binding protein 1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDJXT00000029695

AGTACGCCCAATCACAATGTAGATATCCACTTTGCTAAATTGGAACGTTCTTGCTTACTATGAACCAATTTGTTGAAATTGTTTTATTCTGTGTTTGAAAAAGCGAGAAAACGTAAACGTCTCTCTGATCTCCTAACGCCAGAAAATGTGGATGATGAAATGCTCACGTAAAGTATAACTGaataaatatttatcaaaatgaCATCAAATGGTGAAGTTGAATGCAACTTATTTGCCCCTGATGGAGATGAGGAAGATGGATTTTGTGAAGAAAAGTCAAAACCTGATGTCAACCTAAAGtcaTCACTAGTGAGCCCTACAGCTGCAGAATTTGATACATTACTAAGCGATATTCGAGAATTGATTTCAGAGGGTCAAGGAGAAACTCTTTTTGAGATCGGTGTTGGAGATGATGGTGATGCTGGTTTAAATGAACCAGACATGGAAGCTTCAGTAGCCACTTTACAAAGCATTGCTGAACATCTTGGCTGTCAGCTGAGTATATTACGAGAAAAAGAAGTGGAACATGGAAAAACTGGAGAATATTTACTGCGGACAGAAACAATTGAAGAAGATTTCTCAGAAGTTCGtgTGGCAGTTGTTGGTAATGTTGATGCAGGCAAAAGTACCTTACTAGGCGTACTAACCCATGGTTCGTTAGATGATGGAAGAGGAACTGCTCGGTTAAAATTATTTCGACATAAACACGAGGCTGAGACAGGACGAACCAGTAGTGTTGGTAACGACATTCTTGGTTTTGACAGCAAAGGTGGCATCGTAAACAAACCAGACCCACATAgtgGTGCTTTGGATTGGCAACAAATTTGTCGAGAGTCTTCAAAGGTGCTAACGTTTATTGATTTAGCTGGTCACGAGAAGTACCTCAAAACAACCGTATTTGGAATGACAGGTCATGCGCCAGACTTTGCCATGCTTATGATTGGCGCAAATGCTGGTATCGTTGGTATGACAAAAGAGCATCTCGGTTTGGCTTTGGCATTGAATGTTCCTGTATTTGTCGTCGTCACGAAGATTGACATGTGTCCTGCAAATATTCTACAAGAAACTATGAAGCTCTTAACGAGAATATTAAAATCTCCTGGCTGTAGGAAAATCCCTTTACTTGTATCCTCATATGATGATGTTGTAGTTTCGGCTACGAATTTCACATCTGAAAGgATATGTCCAATATTTCAAATATCTAATGTCACTGGAGAAAACCTCGACCTGCTGAAATCATTTCTCAACTTACTGTCTATTCGAGGAAATTACGAAGTTGCAAAACCACCAATATTTCAAATCGACGATACCTACTCTGTACCTGGCGTCGGAACAGTCGTCTCTGGTGTGACCATGCAAGGTGTGGTGAATGTCAATGATGTGTTGTTACTTGGACCAGACAGCATAGGAAATTTCCAACCGATACCAGTTAAAAGTATACATCGTAAGCGACTTCCGGTTAAAGAAGTTCGAGCTGGACAGACTGCTTCCTTCTCCCTAAAAAAGGTGAAACGCCAAGATATACGTAAAGGTATGGTATTGGTGTCACGGACGTTGGAACCAAAAGCCACGTGGGAATTTGACGCTGACGTTCTTGTCCTCCATCATCCCACAACAATTAGTAAAAGATATCAAGCAATGGtaCACTGCGGAAGTCTCCGTCAAACTGCAACAATTATAAAAATGGATAAAGACCTGCTACGTACGGGCGATAAAGCATCGTGTCGCTTTCGTTTTATAAAAAGTCCTGAATACATACAGGAAGGTACGAAAATGATTTTCCGTGAAGGTCGCACGAAGGCTGTTGGTACGATAACAACGTTGTATTCAGAAATTGAAGGAAGAAGCAGCCACAACACTCGTCAAAGCAAGCAACATAAGGCCTTGATGCATCATAGAGCACAAGCTGCCAACAAACGTGGACCAAAGCCATTTTCTGAACCCGCAACAGAGAAGAAGGTGGATTTGCCGGCAACGACGACGCTTAAGAATACGTCTATAGCGCCGAAGAATGCAAGGACTGTAAAATAAAACACCTTAGcttccatttttatttagaaCTTTTTGATTGTGTTTtaagaaagtttatttttttctgtaaatagCACTGGGGAAGAATGCAACGGTTGTAAAAAAACAACTCCGTACTTTTTATGTGGAACTTCttgcttgtgtttttaaaaatgttaatatttattcTACGTTCTAAAGTCGAAAATAGCATCACTGTCACGTGTCTTTGATGCAAGAATTACTGGAAACctttttaaagtgaaaacaaACATACGGTGTTGCAACAGTGAATATTTTTAGCAACGCATTTGATAACGAACTACATAGCTTTGTATTTCTTTTATAGAAAAAAGGATTGATACTTAAACTTATTTTCGTTGTTTTTAAAGCAACAACGCCGTAGCTaccaaaagattttttttatgggGATGTGGGGTAGAGTGAGAATGAAG

Protein

Uniprot

Uniprot term	Description
Q5XGS8	GTP-binding protein 1 OS=Xenopus laevis OX=8355 GN=gtpbp1 PE=2 SV=1
D2XV59	GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1
O08582	GTP-binding protein 1 OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF03144	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009001	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR035531	Domain	GTP binding protein 1-like, GTP-binding domain	Interproscan
IPR050055	Family	Elongation factor Tu GTPase	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR004161	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43721	ELONGATION FACTOR TU-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003746	Molecular Function	translation elongation factor activity	Interproscan
GO:0006414	Biological Process	translational elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24887	GTPBP1; GTP-binding protein 1	-	Translation factors	ko03012	deepkoala