Gene detail

Detailed information of ENSDJXP00000028435.1 in Hydractinia echinata

Genomic Location: :...
NR annotation: MCE2507588.1, hypothetical protein [Nitrosopumilaceae archaeon]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSDJXT00000032226

ATGAACACGCACACAgtgaaacaattacgagatattgcaaaaggtcgtgggTTAACCGGGtattacaggctacgcaaggctgaactGGTTGCTCTATTGGATGATGTACCACAGAGGCCACCCAGAAGGGCTGGACAACGAAAACCAGTCAGGCCCGTGACCATCATGACTATCATGAAAACCAAGATGcgaggatggtacaactggttagtggacgcagttccaaagcctataaaagaggagGTCAGGAGAACTTATGCGGTCTTCAAACATAAGGTGATGAATCTCTATGATAGTGCGACTAACATCATCGCTGGACCTACGCTTCATAAtgaagtggaaaaagaggctGAAGAAGACTACCTCGAGGATATCCAGAATCTATATGATCggccggggcaagattttacgccccaggaacataagcacgcgttgcacaaaacatttaaaagttttcgcattcctggtataggaggagccgacgtcgacgggtatatagggatggtgcgacccaacgtgaaaaccttgattgGGGACCAGGTGGTGGAAATGGGATCAGCAAAGGTACAGATGTCCCTATGGATCATCTGGAAGAAGAAAACGCTACCAAACTCGGAGGGGGCTAACGACGAGTACATCGAGGTGAAGAAGGCCTTTAACAGCAAGATGACAGAAATCTTCCAAggtagcgacgtagacgacgtgctggataggatgtttgctGATATCAAGACACATGTAGAACATCCAGCACTACCACAGAGTGGATTCACCattagtcgaatcctacacattgatATAGCTTCCAAAAAGGCTATCATCAACCCAGTGAATGAGGATGATGAATGTTTCAAGTGGAGTGTcatagcatccctacaccatacAGAGATCGGAAGGAACCCGAATCGAATATCACAAATGCATCGCTATATTCCCCTCTACAATTGGCAGGATATAGAGTTCCCAACAACTATCAAGGTTATATCCAAGTTTGAAAAGAATAACAcggacattgcggtaaacgtcttGTATGTAATgggaaagaagatcaatatcctgCGGCGATCCGAATATAATATTAAGCGTAACAGGCAGGTTAATCTGTTGCTTATCACGGATGGTTCAAAGACTCACTACACAGCCGCCAAGAGTCTATTGCGACTCCTAGGTAGTGAGACTTCAAAGAACACAAAATCAATGCATTTTTGCCTGAACCGTCTTCAAGCCTTCAACACAGttgaatcgagggacaagcattatggctactgcaaggaTCATGAAGCAGTCAAGGTCACAATGCCAAACGAGTCCGAAAAATGGTTACAATATAGGGATGGCCAACAACAATTCAAGGTACCATTCACAATATATGCAGATTTCGAGAGCCTACTCGTCCCAATAGAAGATGTAAGGGGGACGAAAACCaaaaagctgaacaaacatgtacTATCTGGCTGGTGTACATATAGTACATTTGCATATGGTAatgtaccagatcccctaacAGTCTACAGAGGTGAGGATTGCGTCAAGCGATTCGTGGACCACCTGGAGGACGAGGTGAAGCGGTTATATAAGACCTACCCCCAACAACCAatgctggaactgacagaggtgttaaaaagggaacataaTGAGGCCACCGAATGTCATATATGCATGAAGCTGTTTAACGATGAGAATAACAgtaaagttcgggaccattgccacTACACCGGTTTGTACAGAGGCGCGGCGCATAACAATTGTaacctcaaatacaagatacctGGTCATATACCTGTGATATTCCACAACCTAAGTGGCTATGACGCGCACTTGTTTATTAGGGAACTGGGAGAAAAATACGACAcgcaggacattgggtgcatagcAGAGAATACcgaaaaatatataagtttcaatgttaaaatcaaggtaccacTTGCAGGTATGGGGCATGGTGACGGAGAAATGTATAAGAAGATAGAGATTAGGTTCATAGATAGCTGCCGATTAATGCCATCAAGCCTGgataaattggcaagcaacctcactGACGAACAGTGCAAAAATCTCCGCTGGTTTTTCAACAAGGATGATATATTTCAACTCATGCGTAGAAAGGGTGTCTATCCGTACGAGTACATGGATGGATGGCAACGATTTGAGGAGGTGGCACTACCTCCCAAGGAGgtattttacagcaagctgaatatgaaagGGATTAGTGATGAGGATTATGAATAtgcaaaaaaggtatggaattgtatcaccccagagggtgatgtagtcaccatgggcgactatcatgaTGTGTATTTGACCACAGATGTCTTACTATTGGCCGACGTTTTTGAAACGTTTCGGGACGTgtgcttgacaaactacaagcttgatcctgcccatttctactccgcacccggcctggcatggaaggcagcactcaagTATACCGGAATTGAGTTAGAACTACTCACAGATCCcaacatgctcctgatgtttgaaaaaggtatccgtggaggtataacccaggcggtacatcgctatgccaaggcaaataacaaatacatgggagaacagtacgatccggaggttgaatcctcATACCTACAATATCTCGATGCCAACAACCTCTATGGCTGGGCAATGTGTCAAGATTTACCaacagatggcttcaaatggatcTCAAACGTTGAGGAATTTACAGAAAAACGAATCGCGAAACTCGTCGAAAAGAACAAGTATGGATACTTGCTCGAGGTAGATATCGACTATCCCGAGAGGTTGCATGACAAACATAATGAGTTACCATTTTTACCCGAACGCATGACGATCAACAAAGTCGAGAAACTGGTACCTAATTTGAAAAACAAGCGTGGGTACGTGGTACATATTAGAGCCCTCCACGAAGCCATAAAGCACGGGCTTGAGTTGAAGAAAGTACATAGAGTCATTCAATTCAATCAAAAGCCATGGCTTAaagggtacatcgatcacaacacgaggctgagGACTGCTGCCAAAAATGAGTTTGAGAAGGATTTTTATAAGCTAATGAACTTCTCGGTGTTTGGGAAGACTATGGAGAATATCCGGAGCCGGTGTACATAG

Transcript

ENSDJXT00000032226

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02945	Endonuclease_7	Recombination endonuclease VII	Domain	Interproscan
PF03175	DNA_pol_B_2	DNA polymerase type B, organellar and viral	Family	Interproscan
PF07498	Rho_N	Rho termination factor, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR004211	Family	Recombination endonuclease VII	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR004868	Domain	DNA-directed DNA polymerase, family B, mitochondria/virus	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR044925	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR011112	Domain	Rho termination factor, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31511	PROTEIN CBG23764	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006260	Biological Process	DNA replication	Interproscan
GO:0006353	Biological Process	DNA-templated transcription termination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00164	OGDH, sucA; 2-oxoglutarate dehydrogenase E1 component	EC:1.2.4.2	Lipoic acid metabolism	ko00785	deepkoala