Detailed information of ENSDJXP00000028791.1 in Hydractinia echinata

Genomic Location: :...
NR annotation: TRO68964.1, hypothetical protein FKB34_17600, partial [Glycocaulis profundi]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P27393Collagen alpha-2(IV) chain OS=Ascaris suum OX=6253 PE=2 SV=1
P17140Collagen alpha-2(IV) chain OS=Caenorhabditis elegans OX=6239 GN=let-2 PE=1 SV=2
P17139Collagen alpha-1(IV) chain OS=Caenorhabditis elegans OX=6239 GN=emb-9 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01413C4C-terminal tandem repeated domain in type 4 procollagenDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001442DomainCollagen IV, non-collagenousInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR050938FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR036954Homologous_superfamilyCollagen IV, non-collagenous domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456SI:CH211-266K2.1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan
GO:0005581Cellular Componentcollagen trimerInterproscan

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