Gene detail

Detailed information of ENSDJXP00000033023.1 in Hydractinia echinata

Genomic Location: :...
NR annotation: XP_002164507.1, guanine nucleotide-binding protein subunit beta-5 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDJXT00000037462

TTTaagttgtaaattattttttggagtTTTAATAATTATACATATTGTTTCTTTATCGTTCATACGCGAGACATCACAACATATCAGATAAGGATTATTATCCCAAGTAACGCGTGCGTCTGATTAATAGGGCTAGATTTGCAATTTAATCTTTCCTTTCTgctgctgttctttttttattattttcagcaTCATTCAAAATGGGAAAAGGCGTTTGGTTGTTCGCTTGAGTGCGATTTGGAAAATGGAAAAGTAACAAAGATAAGATTTCCTTAAAGTTCTATGAAAAAAGCACAAAAGtaCATAAACATGGATTTACCATCTGATGCCATAGTTGTACGAGAGTTGGAATCATCGCCTTCAGTTAAGCTGAAATCGCAAACTTTACGGGAACAAAATGGTTCAGCTAGCTCTCCAGCAAATAGTACCAGATCTTTATTTGTTGGAAAGGCACATCCATCTCCACCACCCATTCACACCAACTACTCAGTACCCAATTTATCTTCCCTTTCTCCAGGGTATATGTCACAGGTGAGCCGTAGCATGGAGAGACTCACTTTGCAACCGGGAAGAAAAGATTCTGGAAATTTAGCTCATTTAACTGGACATATAACCTCTGTGCCACAGATTcttctaaaaaataagaaaagtttaGATGAAGAGTCAAAAGTTTTATCTGTAGATTGGTGCTTCGACTCAAAACACTTAGTCACCAGTTTACAAAGTGGTCATTTGTGTATTTGGGATACTGTCGCAAAGGAAAGAGTTCAAATAATACAGACCCCCTGTACATGGGTGTTTGCAGTCTCATACTCGCCAAGTCAAAATTTTGTAGCAGCTGGTGGTTTAGATAGTAAATGTGACTTGTATAAACTTCCCAGAGGTAAGCAGACAACCATTGAAAGTCTGCATGTTGCACAACACCAAAGTTACGTTCTTGATTGTTCGTTTACAACCTCAGATCATCAGATACTTACTGCCAGCAGTGACTCAACATGTGCTCTGTGGGATGTTGAATCTGCACAAATGATCAGAGAATTCAAGGGCCATTCCTCAGATGTCAGAAGTCTTGATTTTCAAAAGTCGACAGGATATTGCTTTCTTAGTGGTTCTGCAGATAAACAATTAGGATTGTGGGATATGCGTACAGGTAACTGTGTGCAGTCATTTTTAACTCATACAGATGAAGTTAACCAGGTTAGGTTTTTCCCTAACGGAGAGGCACTAGCTTCTGTTTCTGATGACATGACTTGCAGACTTTTTGATTTACGAATGGACGTAGAGATTGctatatataaaagaaacagTGTACTTTTTCCAGCATGTTCCCTGGATTTTTCATTAAACGGAAGGTTGTTATTTGTTGGCTACAGTGATCATTCATTTCATGTTTGGGACACACTAAAGAGTGCACATTGTGGTTCTATGTATTCCCACGAGAACAAAGTAAACTGTCTAAAACTTTCTCCTGATGGTTCCTGTTTGGCCACAGGGAGTTGGGATCAAACTGTGAAGCTATGGTCGtagttgttttcatttttttttttaacctctACTTTAAATTGTCTTTTCAATATTGAAGTTCATTATTGCTAATACAGTCACCCTGGAACACTATTCACCAATATTTTCAATATTGAATATAGTTCTATTTTGACTTCCTCTAATTAAAATTTCCCATTGTCAAAGGCTAATCTAGGGAATTATTTTAGGCATTtcggcattttttttttaaatttataatcaGTAAAATCCTGAAAAATTCCTAAGGGAAAGAAATAAGGAATTTCtcatttcattttaaatttctcTCTATTTTGAGGGCTAAAATTTTATGTTGACAAAATTGATATACCAATGTCTAAATTGACCAGTCCCTTACTgccttttttctttcttttttaaaaaagttaacactcaaaaaacattttgcttTCACTATTGATTTATACAAGTTTTGCTATATGATGTGTTTTCTATGAAGTGTGATTTTTGAAAGAAACACACTATTGTAACTTGGTACAGAATTGGAGGAAAATTTAAAGGCTGTGAGCATAGATAAGATATCTTGACTTTAGTAACTTGTAATTTGATTACACTAATATTTGCTATGTTCTGTTTATTTTGAATCcatacattaattttttttaaaatattgaaatgtGTCCATTAGTCTCAAGAAAGCATATCTAAAGTCATCTTTTTACCAGTGGTGTCTTTGCATTTTTGTTATTCTGATCAGTTTTAAAGTTCTCATTATGATTCAATCATATACATATAAatacagcctttctaatttcaatttatttaacgCTTCACTTGCTTAATGTCAGCAAATTTGTCTTTCGTGTGTAATTTGTTTTGTGATATCACATTCCAAGAAAATGATTTACCAGTAAATTTAGAGAGAAAATGAGAGGAAAACTTTAGAGTGCTGacatgaattagaaaggctaagATAGGTATGCATatcttgtgggtaaaatgtttttttcatgtGTTTTATACACAAAACAGGaaagaatagtatatatattctttgtgTCCTTGCTGGCAAAgactaaatttttgaaagcACATCAGAAccattttgaaatatatatacatattatatatatatatatgatgtatTGATACGGTTTTGTAGTAAGAGTTCATGTTGTAATTAATGtcgatttatttttgttgtatttctttCTAATTTAAATTAGGCTATTCCTGGGTCTGCTAAAATCTTTATCCTTCTTGTCGAAGAAAGGAATATAGAATATAATTACATTTGCCATGATTATTTGATTACTTCGGTCATCTGGATTTGAATGTTTGTTTATCATTAAAAGAGAATTAACGTCAAAATTGAGATGCttcgaaatattttaaatatatttttgacagtCCTTATTTCagcttaatatttttatttttgttgaaattatAAGCAAATAATGTCTTGTTTCTTTCCAAGACAGTGTTGTACAGgttgttataaatattttatcttttcctTCTTAATAACTGTGACCTGTATTTGCTCCATGTAAACCATAAGTCATCTCATGATGCTTTAAATAcattaaatacaaaatataaacaaattagaTATCCTAAATTTTACAACTTTCacacaaaatttatttcacAGATTTGTGAATTTAAGTTTAGAAACTAAAAAATAGGTCTACGGGGTTCGGATTAGAAATGTAAATTTGTTTCGCACAAAATTGCTGACTGCAGAGAAGAAAGCCTCTTTGCAGCTAGGATCACTGTAGGCCACTTGCCATGGAACTCTtgttaattattattttgttacaACAACCATTATCAAAATAGGTAATGTAAAAACTGGAATTTGTAATTCTAACGTTCTCTTTATTGAATGATTCACAAATACGGCATTTCGATTTGCAAATCCACAATTTGAATTCTGGgctatttctaaaaaatttggtTAGTTGTTTGCCAAAGTTGTATTTTGATGTTAATTCTCCCTTAAGTGCAGTATTAGAGGTTTCATCTGTGCTATCGCTATGTtttgctttgaaaaaaaatcttttttcaggCTGttgttaaaaaactgtttttttgtcCTAGCCTAATCATTCTTAAAGGGATCTTATTGATCCTAAAAAATAGCAGGGGAAGATAATTGAGGTATAAACCTTGTCCTCACTATGTTAAACCTTTAAATATTCAAGACTCTGTTTTT

Protein

Uniprot

Uniprot term	Description
Q6PNB6	Guanine nucleotide-binding protein subunit beta-5 OS=Oryctolagus cuniculus OX=9986 GN=GNB5 PE=2 SV=1
Q5RDY7	Guanine nucleotide-binding protein subunit beta-5 OS=Pongo abelii OX=9601 GN=GNB5 PE=2 SV=1
P62882	Guanine nucleotide-binding protein subunit beta-5 OS=Rattus norvegicus OX=10116 GN=Gnb5 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR016346	Family	Guanine nucleotide-binding protein, beta subunit	Interproscan
IPR001632	Domain	G-protein, beta subunit	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19850	GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005834	Cellular Component	heterotrimeric G-protein complex	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007212	Biological Process	G protein-coupled dopamine receptor signaling pathway	Interproscan
GO:0030159	Molecular Function	signaling receptor complex adaptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04539	GNB5; guanine nucleotide-binding protein subunit beta-5	-	GTP-binding proteins	ko04031	deepkoala