Gene detail

Detailed information of ENSDJXP00000035451.1 in Hydractinia echinata

Genomic Location: :...
NR annotation: XP_047128259.1, Bardet-Biedl syndrome 2 protein isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSDJXT00000040276

ATGTTGGCCCCAGTCTTTTCTATGAAACTGAACCATAAGATCTTTCCACGCATGGCAGCAATTGCAAAATTTGATGGTACTCATCCATGTCTCACTGCTGCAACAACTGCTGGAAAAGTGTTTATACATAATCCACACAAACGTTTGGATCGTCTTGGTGGTCGTCTTGAACAAAACAAAACCAATGCTGATATCACTTTACTCAATATCAACCAACAAGTTAGCGCATTATGTTGTGGCTCTTTAGATGACAGTCAACGAGACGTGTTGTTTGTTGGTACTCCAACTAATTTGTTGGCTTACGATGTGGAAAATAATTCAGACCTTTTTTATAAAGAGGTTCCAGATGGTGTGAATTCTCTTCTTGTTGGAAATGTGGGTACAAATCCAACTCCATTGGTTTTAGCTGGAGGTAATTGCTCAATTCAAGGATTTGACTCAGAAGGAAGTGATCAGTTTTGGACAGTGACAGGGGATAATGTTTGTTCATTAGCTCTTGTTGATTTTGACGGTGATGGTAACAAAGAACTACTTGTTGGTTCAGAAGACTTCGATATCCGAGTTTTTAAAGATGATGAGATCATTGCAGAAATGACAGAAACAGAGGCTGTTACTTCACTGCATGCATTATATGATAGCAGATTTGGTTATGCTCTATCGAACGGTACAGTTGGAGTTTACGATAGAAGTGCTCGTTACTGGAGGATAAAAtcAAAAAATCAAGCTGTAACCATCCACAGTTTCGATTTAGATGGAGATGGTGTACCAGAACTTGTGACTGGGTGGTCTAATGGAAAGGTGGATGCAAGAAGCGATCGTACCGGAGAAGTTGTGTTCAAAGACAACTTGAGCACTGCTGTTTCAGCTGTTTTAGATGCTGACTACCGAATGGATGGTAAAGACCAGTTGGTCGTTTGCTCGATGGATGGAGAAGtgaAGGGATTTGTTCCCACGGTATCCGAGAATAAACAACCGGTCGCCGATTTGACGGTACAACAAGATGCATTAAGAGAGCTGTCTCAACGAAAGCAAAACCTGTTGCTCGAGATATCAAACTATGAAGAAAATAGCAGAGTGGCTGTTAAATTGGAGAGTGGTCAAAGTATGCCGTCCAACTACGGCTTGATACCAGCAAATACACAGCTGCAGACGTCGTTACATGTTGTAGCCGGCAGCGAAGAATACCCAGCTTACGTGGAATTGACCGTCCGAACGACAAACGAGACTGTTGTACGATGTGTGATGATCTTCGCTGAAGGTATATTTGATGGTGAAAGTTTTGTCATTCATCCTCAACAACCTGAACTTTCGAACATGCTTCAAATACCCATCTACCCACCTCGTGATATTCCTGTCGACCTGCATATCAAAGCTTTTGTGGGATACAAAAACAGATTGTTCTTGACTCTACTTCGTTCTTTTAGATTTTCACTGTATGAGATATGTCCAGAAGGGTACACAGAACCGAAATCCTTTGTCAAATTTGATGTCAACGAAAGAGTCAACAGGGTGGTGTTATGGGCCAATCAAAACTTTCTGCTCACGAACGAAATCACCGCAACAGGAGGAGAACTGGACATGAAATTTTTATCAGCTCGTACTCAACTACCAATTCACATCACCATGTCATCGCAGGGACAGGTAATCATTCGAACGGATGATATCGGCTTGGCTGGTGATATTATACAAAACTTAGCTTCATTCTTGGCCATAGAGGTTcgtattctttttttattgtctAATGTATGTTTTGTCAAGAAGTTATGGGTTGTTTGGACCCATATCGAAATTCTACTTGTTGATGAACTACACAATGTGTGCAAGCAACTCACAGCTGAAATGGCTGATCACTCCAATCTTATTCGAAGTTTGGTCGTTCGAAGTGAAGACGCTGGATTGCTCTTCGATATgaaaaatatGAAACGTAGTTATATGGAGCTGTTTGATTTAAATCGAGACTTGATCAACGGTTACAAAATACGTTGCACAAACCATGAGGAGTTGTTGAAATGTTTGAAAGTTGTCAATCAGACTATACAGAAAGCCGGAAACCTGCGAGTTGGCAAATCAAAAACACACGTCATCTCCGCCTGTCGAAACGCCATCAAAACTAACGACGACGTCGCGCTCGTCAAAATCATCCGACACGGAACGACGAGTAGTTGA

Transcript

ENSDJXT00000040276

Protein

Uniprot

Uniprot term	Description
Q9BXC9	BBSome complex member BBS2 OS=Homo sapiens OX=9606 GN=BBS2 PE=1 SV=2
Q99MH9	BBSome complex member BBS2 OS=Rattus norvegicus OX=10116 GN=Bbs2 PE=2 SV=1
Q9CWF6	BBSome complex member BBS2 OS=Mus musculus OX=10090 GN=Bbs2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14782	BBS2_C	Ciliary BBSome complex subunit 2, C-terminal	Family	Interproscan
PF14783	BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	Repeat	Interproscan
PF14781	BBS2_N	Ciliary BBSome complex subunit 2, N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR029333	Domain	Ciliary BBSome complex subunit 2, C-terminal domain	Interproscan
IPR029429	Domain	Ciliary BBSome complex subunit 2, middle region	Interproscan
IPR016616	Family	Bardet-Biedl syndrome 2 protein	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR029430	Domain	Ciliary BBSome complex subunit 2, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32465	BARDET-BIEDL SYNDROME 2 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0031514	Cellular Component	motile cilium	Interproscan
GO:0034464	Cellular Component	BBSome	Interproscan
GO:0036064	Cellular Component	ciliary basal body	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan
GO:1905515	Biological Process	non-motile cilium assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16747	BBS2; Bardet-Biedl syndrome 2 protein	-	Cilium and associated proteins	ko03037	deepkoala