Genomic Location: :...
NR annotation: XP_047136189.1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Hydra vulgaris]
| CDS | |||||
| ENSDJXT00000043317 | |||||
| Transcript |
| ENSDJXT00000043317 |
| Protein |
| ENSDJXP00000038083.1 |
| Uniprot term | Description |
|---|---|
| B4F769 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Rattus norvegicus OX=10116 GN=Smarcal1 PE=2 SV=1 |
| Q9NZC9 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Homo sapiens OX=9606 GN=SMARCAL1 PE=1 SV=1 |
| Q8BJL0 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Mus musculus OX=10090 GN=Smarcal1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00176 | SNF2-rel_dom | SNF2-related domain | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR000330 | Domain | SNF2, N-terminal | Interproscan |
| IPR049730 | Domain | SNF2/RAD5-like, C-terminal helicase domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR038718 | Homologous_superfamily | SNF2-like, N-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45766 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0031297 | Biological Process | replication fork processing | Interproscan |
| GO:0048478 | Biological Process | obsolete replication fork protection | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0140658 | Molecular Function | ATP-dependent chromatin remodeler activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14440 | SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 | EC:5.6.2.- | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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