Gene detail

Detailed information of ENSDJXP00000038663.1 in Hydractinia echinata

Genomic Location: not available for this species
NR annotation: XP_047123347.1, protein HGV2 [Hydra vulgaris]
Species Hydractinia echinata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDJXT00000044032

TTTTCGCATCCAAAGAAGACATACGCAACTATAAATCCTATTGGCTATCGGTCTACCTGTGACGTAATGGTAAACTTTATTCAAGAACGCGGGAAAGTAAATTTGTATACTCTGAGTTGTTGAATGAAAGTATACTGCTTAACTTTTTGAAGTGTTGACATAAGATAAATCATGGTCCAGGAAGTTATAGACGAAAAGCCATCATCTTCAAAACCAGAACCAAGTGAAGAAGATGTGAAGACGTTGCAAGAATTAATGTCTGCAGGAAAACGACATCTTATCTGTGGTGAATACCAAGTTGCTCTGGATTGTTTCGTTGGATTGTGTGAAAAACTGGCAAATGTTTATGGCCAGACTGCAGATGAATGTGCAGAGGCTTATCTCTATTATGGAAAAACATTGTTGGAACTGGCACGATTGGAAAATGGTGTTCTTGGAATGAAAGAAGcTCCAGAAGAGGATGAAGAcgatgaagaagatgaagagGATGTAAATGATGatggagAAGGACAGAAAgaacaagaaaacaaagaagATGAAATAAAAACTGAGAAACAAAAAGAAGGAGATTCTAATAATGACGCAAAGGATGCTGGGACTGAAAATGTAATCACTGAAAAAGGTCAAAGTGAAAACGAGAATGGCAGCGAGATAACGAAATCAGaaaatgaattaaaagAATCCAGTTCAACAACGGAAACTACAAAAGCAGCAGATTCAAAATTGGAGGACAGTGGAGAAGAAGATGTGTCAAACATGCAGCTGGCTTGGGAAATGTTTGAATTGACTGCTTTTATATGCGTcagGATGTTGAAGCTGGGAAGTAAGAAGGAAAAAGAAGCCAAGTTAACTCTAGCAGAAGCAAAATATGGATTAGCGCAGATAAGCCTTGAAACAGAACATTATGTGGAGGCGAAAAACGACTTTACTGACTGTTTGGAATATTATAAAGAAGTTTTAGATGATCCAACTGATCGAAGACTCGCAGAAGTTCACTATAATATAGCTTTGTCTGTATCGTTCGATAAACAATTCGATGAAGCCATTAAACAGTACAAGTGTGCTGTGGAATTACTTGAGAAACGTGTGGCGAACCTTGAAGAGAAAGTGAAAGCAGCTGAAGAAAAgggaggaaaagaaaaagccacTTCCGAACAAGAAGAATGGAATAAAGAAATTACTGAATTGAAAGAACTTATTAAGTCAGATATGATGGccaagattgaaGATGCTGAGGATATGAAAGCACAAGCCGAAAAATCAGCTCAAGTGATAAAAGAAGCTACAAAAAACGTATTCGATTCTCTTAACTCGAATGGTTTCGATAAAGGATTTGAAGAACTGAAAAATATTGCTACAGCGAAGGTTCATGACATCAGTAGTAAAGTTCGTTCCGTCAagAGGCCGTCAGACGATGAAGGAAAATCAGAACCAAAGAAGTTGAAAAGTGAAACAAATCATTCTGATGTGAACGGTAATTCTCATTCTGAACAAAAAGTTTCTCCCTCAGAAGTCTGAAAGCAGAAATATATGGTGTATGGTGAATCTTTTAAACGTTGTGGACGAAATGTTTGTACCATGGATATAAAGTGACGGTATGTTGCggtattaaaaaatttaagaaataaaacatttaaataatactataaaaatttgtaaattataaaaggataaaaaaaagatgtgtacatatgtaaaaaaaaaacgtttcctTTAAGTTGCTTGCTCGTTCGTTCGTTCTTATCCAGGTATAATGCCTGAGATGGTTTCTGTGGgttaaaactgttttgatttgCAAAATGTGACAAATTTAGCAAGAAAAGTATCCTGGAAATATTGGTGACATCAGCAGTTAATATAGATAGTTGTTTTTCATTGCACATCCGTTTGTTCATTCCCAACAGCTCACTGGCAGGCAGGTGTTAGTAATGCATCTCTTCAATATGATCAGGAATTAAATTAGTCCAAATTTAAGAAGTTCAATATGTTTGCTAATCACAAACTTTTCATAGAAAACACGGttgcttaaaaaatgaaaattttgtgtCCAAATTTTGTCCCCCAAAATCGATAATTACATCAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q02508	Protein HGV2 OS=Halocynthia roretzi OX=7729 GN=HGV2 PE=2 SV=1
Q66HD3	Nuclear autoantigenic sperm protein OS=Rattus norvegicus OX=10116 GN=Nasp PE=1 SV=1
P49321	Nuclear autoantigenic sperm protein OS=Homo sapiens OX=9606 GN=NASP PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003880 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSDJXP00000038663.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR051730 all species →	Family	Nuclear Autoantigenic Sperm-associated Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15081 all species →	NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0006335 all species →	Biological Process	DNA replication-dependent chromatin assembly	Interproscan
GO:0034080 all species →	Biological Process	CENP-A containing chromatin assembly	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11291	NASP; nuclear autoantigenic sperm protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.