Gene detail

Detailed information of ENSDJXP00000043582.1 in Hydractinia echinata

Genomic Location: :...
NR annotation: XP_002156784.1, cleavage and polyadenylation specificity factor subunit 4 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O95639	Cleavage and polyadenylation specificity factor subunit 4 OS=Homo sapiens OX=9606 GN=CPSF4 PE=1 SV=1
Q66KE3	Cleavage and polyadenylation specificity factor subunit 4 OS=Xenopus tropicalis OX=8364 GN=cpsf4 PE=2 SV=1
Q6DJP7	Cleavage and polyadenylation specificity factor subunit 4 OS=Xenopus laevis OX=8355 GN=cpsf4 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18345	zf_CCCH_4	Zinc finger domain	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR045348	Family	CPSF complex subunit CPSF4-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23102	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0098789	Biological Process	obsolete pre-mRNA cleavage required for polyadenylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14404	CPSF4, YTH1; cleavage and polyadenylation specificity factor subunit 4	-	Messenger RNA biogenesis	ko03019	deepkoala