Gene detail

Detailed information of ENSDJXP00000044009.1 in Hydractinia echinata

Genomic Location: not available for this species
NR annotation: MCK5945786.1, GTPase Era [Mycoplasmataceae bacterium]
Species Hydractinia echinata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A5IXQ6	GTPase Era OS=Mycoplasmopsis agalactiae (strain NCTC 10123 / CIP 59.7 / PG2) OX=347257 GN=era PE=3 SV=1
Q98QI1	GTPase Era OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=era PE=3 SV=1
Q892S2	GTPase Era OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=era PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007852 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07650 all species →	KH_2	KH domain	Domain	Interproscan
PF01926 all species →	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030388 all species →	Domain	Era-type guanine nucleotide-binding (G) domain	Interproscan
IPR015946 all species →	Homologous_superfamily	K homology domain-like, alpha/beta	Interproscan
IPR004044 all species →	Domain	K Homology domain, type 2	Interproscan
IPR005662 all species →	Family	GTPase Era	Interproscan
IPR009019 all species →	Homologous_superfamily	K homology domain superfamily, prokaryotic type	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006073 all species →	Domain	GTP binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42698 all species →	GTPASE ERA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0000028 all species →	Biological Process	ribosomal small subunit assembly	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0043024 all species →	Molecular Function	ribosomal small subunit binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDJXP00000044009.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.