Gene detail

Detailed information of ENSDKPP00000000489.1 in Plumapathes pennacea

Genomic Location: :...
NR annotation: XP_020620890.1, S-adenosylmethionine decarboxylase proenzyme-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDKPT00000000489

attttggagcgatgctcCAACACGAttacagaaaacggcaaatagaaagaaaccataacagcgcgaaaattagttattaatacaatggggcgaccgctgacataatataatcagactgcgggaggggataaccatccttacgtgggaattcgcttcccacGTGGGCTGAACACAattatttgcaattttcactcGTTTCAAACGTCTTTCAGTTCCCAAAATTAGGCGAAGTTGAAAATCGCATGTATTTTAGACTAAGGCATCGCTCTGCGACGTTCGAAATATGTGCGAGGCTGGATTCTTTGAAGGACCTGAAAAACTTCTGGAAGTTTGGTGGAAGCCGAGAGCCGAGCTGACAGAGAATGAACGCGGTTTGGGAGATATGAGAAGAATCCCTCGAGAGAAGTGGGAAGACCTCTTGAAGCTGGTAAACTGTGGGATAATCAGTCAGGCAGAGAATGGAGACATGGTGGCTTACCTTCTCACTGAAAGCAGCATGTTTGTCTCAAAAGAAAGGGTTATCCTGAAGACTTGTGGGTCCACAACATTGCTGTACTGCATCAAGCCTCTGCTGAAACTGGCCAAGGAATATGGCTTGGATGAAGTTCAGGACTTTTTCTTCTCCAGGATGACTTACCAGCAACCTGCACTTCAACATGGGCCACATCAGACATTTGGAGAAGAGATTGAGTGCCTGGACAAGATATTTTCAGATTACAGCGCTGCAGCATATGTACTTGGAAAGATTAACGGCCCTGACACATGgtATCTCTACACTCTTACCAATGCACTGCCAGGTGTGAACATTCCTGACCAGACAATAGAAATCTTAATGCAGGATCTAGACAAGGAAACCATGAAAAAATTCTACAAGGGGGTTTACCCAAACACCTCAGAACTTAGAAAGGATCTTGGAATTGTGGACTTTGTACCCAAGTCAATTATTGATGATTCAATGTTTGATCCTTGTGGTTATTCACTTAATGGTCTGCTTTCAGACAGCTATTTTACTATCCATGTAACCCCACAAGAAGAATGCTCCTATGCAAGCTTTGAAACCAATTTGAAGTTGAGCTCCTACCATGAACTGATCAACAAAGTGTTAACAGCATTCAAGCCTGGACGCTTCTTAATGACTCTCTTTGCAAATGAGGGTGCACCTTGTGGGTTTTCATACAAGACTTTTGAGGAAGGAAAAGTTCATGGATATGAACGAACAGACCTACAACTTTGTCAGATGAAGCATTACAATCTGACGTATGGTCACTATGAGAAAGTGAAGTGCACCAAAAGCCTGGACATCAAGAAAATATTACCTACAGTACCCACTGTACCCTAAAATTTATCAGCTCAGGTATTGCAAATATTCTGAGAGAAAACAGCTATAAGGAATGTGTATAAACattgaaacaaaacatttcaTGTCACTCTTAAAAGTATGTCAGAGCTTTTTAGAGGTTCAAATGGGGAAAAAATGCAACATTTCAGCTAGTAGCATAATTCAGGCCCTGGAGACTCTGACTGTACATTTTATAGTGTCACCTCCTGCTACAAAGGACCTGTTGTTAGCAGGAAAAGCAGAAATCAAGCTTCATCCAACATCGTAAAATATGGTGGCCTGACAAGTCAAACAATATTGGACAGCTATGTTGGGCTGTTTGGACAGGCCTTTCATCAAggaattatatattttttaagttaacccttttactcatgaacacagaatacaaattctcctaactattttagaataaaatgtataagtgatatGGTGATAATAATTTAGTAGGCCAATCAGTTTCcatatcaagtggcaaattctctatactgtatgatatatctctggtgagagactgaaggagaaaattgaagttcataACTCTTAGGAGCTTATGGGTTAAGTCAGGAGAAAACTGACCTGTCACCTCTGTGAATAAAAGTCATAGATTATCTTGATGCTGATCAGGACCCATCTGTTCTTTGTACACAGGAACCACAGCAATAGTACCAAAAAATGATAGATTATCATTGCAATGATATTATTTATGACTCATCTGTTCTTTGTGCACGGGAACCACAGCAATAGTCCCAGTACCCTGCTGTTTCCAGTGGAACTCCATAAGCGCCATGCAAAGTAAAACTACTTGGTGCACTGTGAAGAGATTGTGGCATAGACAAATACTGTTCATGACATTCAACAAGAATCTTTGCCATAGCCTCAAATGCCTCTTGTACATTTGTGCAGTCCTTGGCACTTGTTTCTAAGTACTCCATTGTATGCAGAGAGACAAATTCCTGGAAATATAAAACATAATCTTGATTGGCACTTGTAAAGTGA

Protein

Uniprot

Uniprot term	Description
P17708	S-adenosylmethionine decarboxylase proenzyme OS=Rattus norvegicus OX=10116 GN=Amd1 PE=1 SV=3
P28918	S-adenosylmethionine decarboxylase proenzyme OS=Mesocricetus auratus OX=10036 GN=AMD1 PE=2 SV=1
P50243	S-adenosylmethionine decarboxylase proenzyme OS=Bos taurus OX=9913 GN=AMD1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01536	SAM_decarbox	Adenosylmethionine decarboxylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001985	Family	S-adenosylmethionine decarboxylase, eukaryotes	Interproscan
IPR018166	Conserved_site	S-adenosylmethionine decarboxylase, conserved site	Interproscan
IPR016067	Homologous_superfamily	S-adenosylmethionine decarboxylase, core	Interproscan
IPR048283	Family	S-adenosylmethionine decarboxylase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11570	S-ADENOSYLMETHIONINE DECARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004014	Molecular Function	adenosylmethionine decarboxylase activity	Interproscan
GO:0006597	Biological Process	spermine biosynthetic process	Interproscan
GO:0008295	Biological Process	spermidine biosynthetic process	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan