Gene detail

Detailed information of ENSDKPP00000002623.1 in Plumapathes pennacea

Genomic Location: :...
NR annotation: XP_031562039.1, ribonucleoside-diphosphate reductase large subunit-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSDKPT00000002623

ATGTCAAATAATGTCGGTTCACCCACGACGGAGCACATCAAGACGGGCATGTACGTCATTAAAAGAGGTAAGATGTCTGGTTTATTCGGTTTGTTCCAAGTCCGCCATGTTAGTTTGACGGAGCACCGTTTTGTCTCCCTTTCAGACGGGCGCCGTGAGAAGGTTTTGCTGGACAAGATCACCTCTCGGATCAGTAAACTGTGCTTTGGACTGAAGAACGACTTCGTCGACCCTGTTGTCATCACAATGAAGACCATCTCAGGGATGTACTCTGGTATCAAAACCACTGAACTGGATACATTAGCCGCTGAAACAGCTGCGTCCATGACAACAAAGCACCCTGACTATGCCATTCTTGCTGCTAGGATTGAAGTTTCTAATCTCCACAAGATGACTAAGAAGTCTTTTAGTGAGACGATGGAGGATCTATACAAATACGTCAACCCCAGGAATAAGAAGCACTGTCCACTAATCTCCAAAGAAATCCATGATATAATCATGCGGAATGCAGACcGCCTGAATTCAGCTATCATTTATGATCGTGACTACCATTACAACTACTTTGGCTTCAAGACCCTTATGAGGTCATACTTGCTGAAGTTGAATGGTCAAGTAGCAGAGCGCCCACAGCAGATGTTGATGAGAGTGGCTGTCGGAATTCATCACGAAGACATAGATGCGGCAATTGAAACCTATAACCTCCTTTCTGAGAAGTGGTTCACTCATGCCTCCCCTACTCTGTTCAATGCAGGGACCTGTAGACCTCAGTTGTCAAGTTGTTTCCTGTTGACTATGGCAGACGATAGTATCGACGGTATTTATGATACCCTTAAAACATGTGCACTGATATCCAAATCAGCAGGCGGCATTGGGCTGAATATACACAACATCCGTGCATCTGGAAGTTACATTGCTGGGACCAATGGGACATCTAATGGGCTGGTACCAATGCTGCGAGTATACAATGCCACAAGTCGGTATGTTGACCAGGGTGGGAACAAGAGGCCAGGAGCCATTGCAATGTATCTGGAGCCTTGGCACGCCGATGTTTTTGAATTCTTAGATCTCAAGAAAAATACAGGCAAAGAGGAACAGCGTGCCAGGGACCTTTTCTATGCCCTGTGGGTTCCAGACTTGTTTATGGAACGAGTGGAAGCGGATGGGACTTGGTCACTCATGTGTCCTAATGAGTGCCCTGGACTTCAGGACTGCTGGGGGAAGGAGTTTAATGAACTTTACACCAAATATGAGTCGGAAGGCAGGTTCCGCAAGCAAGTTAGGGCTCAGAAGCTGTGGTTTGCCATCCTGGATTCCCAGATAGAAACTGGAACACCATATGTGATGTACAAAGATGCCTGCAACAGAAAGAGCAATCAACAGAATCTTGGCACCATAAAATGCAGCAATTTGTGCACAGAGATTGTGGAGTACTCTTCACCCGATGAgGTTGCTGTGTGTAACTTGGCATCAATAGCACTGAATAGATTTGTGCAGACAGACAGCCAACCACCCAAGTTTGACTTCCAGAAACTTTTTGAAGTTACTGGGGTGGTGACCCGTAACCTCAACAAAATAATTGATGTCAACTATTACCCGGTGCCTGAGGCAAAACGATCAAACACGAGGCACAGACCAATAGGCATTGGTGTTCAGGGTCTTGCTGATGCATTCATCAAGATGCGATTTCCTTTCACAAGTGACAAGGCCAAGGAGCTCAACAAgcaaatctttgaaaccaTCTACTATGGAGCTCTGACAGCATCCTGCAAGCTGGCAGCAGAGCATGGACCATATGAGACATATGAAGGGTCACCAGCCAGCAAAGGGTTGAAGTTCAGTATCAGGGCCCTATCACCCCCACATTTTGTTCCTAACATACTCTGTAATGTTCTCTACAGGCATGGCTTGCGCAACAGTCTGTTGCTTGCTCCAATGCCGACGGCCTCGACTGCCCAGATCCTCGGCAACAACGAATCAGTGGAGCCCTACACAACCAACATTTATGCCAGACGTGTGCTTTCTGGAGAATTTCAGGTTGTGAATCATCATCTGCTGAAGGACCTGACCGAGATGGGTCTTTGGTCTGACGTCATGAAGCACCAAATGATTGAAGCAAATGGGTCTATCCAGCATATCGATGAGATTCCAGATGACATCAAAGCGCTGTACAAGAATGTGTGGGAGATCTCCCAGCGAGATCTCATTGACATGGCAGCCGACCGTGGAGCATACATCGACCAGAGCCAGTCCTTTAACGTTTTCATCGCCGCGCCCAACTACGGCAAACTTAGCAGTATGCACTTTTACGGCTGGAAGAAGGGATTAAAGACTGGCATGTATTACTTGCGCAGCCGCCCGGCCGTCAACGCAATTCAGTTCACACTCGACACAGAAGCCATCAAGGCCAAGAAGAGCAAGGCTGTCCCAAAAGAAGAAGCGGCGGAAGCCGTCATTGCCTGCTCCATCAAAAACCCTGAGGCCTGTGAAATGTGCAGCGGTTAA

Transcript

ENSDKPT00000002623

Protein

Uniprot

Uniprot term	Description
P07742	Ribonucleoside-diphosphate reductase large subunit OS=Mus musculus OX=10090 GN=Rrm1 PE=1 SV=2
P23921	Ribonucleoside-diphosphate reductase large subunit OS=Homo sapiens OX=9606 GN=RRM1 PE=1 SV=1
Q5R919	Ribonucleoside-diphosphate reductase large subunit OS=Pongo abelii OX=9601 GN=RRM1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02867	Ribonuc_red_lgC	Ribonucleotide reductase, barrel domain	Family	Interproscan
PF00317	Ribonuc_red_lgN	Ribonucleotide reductase, all-alpha domain	Domain	Interproscan
PF03477	ATP-cone	ATP cone domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000788	Domain	Ribonucleotide reductase large subunit, C-terminal	Interproscan
IPR005144	Domain	ATP-cone domain	Interproscan
IPR039718	Family	Ribonucleoside-diphosphate reductase large subunit	Interproscan
IPR013346	Domain	Ribonucleotide reductase, class I, alpha subunit, C-terminal	Interproscan
IPR008926	Homologous_superfamily	Ribonucleotide reductase R1 subunit, N-terminal	Interproscan
IPR013509	Domain	Ribonucleotide reductase large subunit, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11573	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004748	Molecular Function	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005971	Cellular Component	ribonucleoside-diphosphate reductase complex	Interproscan
GO:0009263	Biological Process	deoxyribonucleotide biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10807	RRM1; ribonucleoside-diphosphate reductase subunit M1	EC:1.17.4.1	DNA repair and recombination proteins	ko03400	deepkoala