Gene detail

Detailed information of ENSDKPP00000019431.1 in Plumapathes pennacea

Genomic Location: :...
NR annotation: XP_022799184.1, heterogeneous nuclear ribonucleoprotein H3-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDKPT00000019432

GGCCCTCACAAAGAACCATAAGTTTATGGGGAAAAGGTATGTGGAGGTCTTCAAGTCCAAAGTCGGCGAGATGGATTGGGTGTGCAAACGCATGGGCCATGTACCAGACAGAAGCCGTGAGTCTGTCGTGAGGTTACGTGGTCTACCTTTTGGGTGTACCAAGGAAGATGTTGCACAGTTCTTTACTGATACATTGAGATTTTCAAGAGTTCCAAACAGGAGATCAAGTATGTTGTTGCTCCTAAACCACGGCCCTTGATGTCCACTCGTCCAGGCCCCTATGACAGAATGGCTGGctttggtggtggtggtggtaatGGCGGtagcggagggggagggggtggaggTGGAGGTGGTGCTTCTATGGGACGATTTGCAAGAGGAAATGGTTTTGAAAGAAGATTCCGAGGTCGTGGCAACTTTGGTGGACCTGTGTTTGGAGGTGGTTATGGAGGTGACTTTAATGGCTTTGGTGGCAGTGGGAGCATGATGAGAGGGAGTCGTGGTGGACGAGGGGGTGGATCCATGCGAGGCAACTTTGGTTTTGGAGGGCGTGGTGGATTTAGTGGAGGTGGGTTTGATAATCAACAAGGAACTACCGGCCACTCTGTACACATGCGCGGTTTACCTTATGCTGCCAAGGAGGCAGACATAAAGCAGTTCTTCATGCCACTTAATCCTGTCAGTATACGGATGGAGGTGAATTTCAGACAGCAGTTTAATGGAGAAGCAGATGTCGACTTTGCAACTCATGCTGATGCTAATGCTGCCATGGCCAAGGACAGGAATAAGATGGGTCACAGATACATTGAACTGTTTCTGAGATCAGAACCTGATGGCAGTGAGGAAGGTCAGTGGGGTTCAGGATCTGGCTTTGGCAGCAACAGTGGAGGTAACTTTGGCAACACTGGTGGAAACTTCGGTTCAGGAGGTGGCAACTTTGGAGGTGGTGGAAACTTTGGAGATAACTCTGGCAACTTCGGCAACTTCAGTGGGGGTGGCGGCAGTAACAGCTTCAGCAACCAAAGTGGCACGGGAGGCTTCAACAACCAAGCCAACACGGGCAGTGGATTTGGCAACAATCAACAAGGGAACTTTGGCAACAGTCAAGGCAGCTCTGGTAACTTTGGTGGGCAAACAGGAGGTGGCAATTTTGGTGGACAAAACAATAGCCAGAACTTTGGCAACCAAGGGAGTGGCTTTGGAGGGGGGAACACAGGAGTATTTGGGTCCACAAATGCAGGTGCATTTAATGCACAGTCGGCTTTCAGTGGAAGTGGGGGATACTCTGCTAACCAAGGAAGTAACAGTGGATACAACACATCAGGGTTTGGGAACCAAATGTCTGCTGGAATGAACACTGGTTACAGCAGTCAGTCTGGTGGGTATGGAGCACAACAGGGCaatcaacagcaacaacaacagcaacaacaaacaaattacGCAGACAACACATATGGAAACGTATCTGGAGGATCGTTCTTTACTGGCATGCAAAAACAAGACTCCAGTGGCACTACAACAGGAATGGTTTCCTACCCTGGTTACCAGTGAACACTGAAAGTTGACTAAAGGACAATGTGTCAAATCATGTCTACTCAGGCACTTAGAGGCCCAATCTGTAATAAAGACAAGAAtgttcattaatttttttcacagcTTTATATGTTTGCTGAGcagtagtttttgttttgttgtaaaTTTTATGGTTCAGTTGCTGGGTTGAATGAGCTGGGTAAATGGGGAGGAGTTATAACCTGTAGTAtgcttgtgttttttttttttgtttgttttttttttacctttttgtAATCTTTGGGCCCACTTTCTTTTCATCTTATATCTAATATTTGATTTATTAAACTGACATGTTTATACATCTTGGAGGAAAATAATGTAGTTAaagttattttacattaaaatATTTGTGCAACACATAATCTGGTGTATCTCCCTTTTTTATGTGACATTCTTCTGGGTGGATAGTTTaaaatcttgtcaaacttaAGTAGTTACAAAGCAAAGATAGCCTGGGAAAGAAACATGTCTGAAGAAGAATACAACTCAGTGGTGAAGGGAAAAGGAGCAGAAATTTTACTTCCTTTTTCCACTTTCTCTGTTACTCAACTTAGGTCTGTTTAAATCGAAAAAAG

Protein

Uniprot

Uniprot term	Description
Q5E9J1	Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus OX=9913 GN=HNRNPF PE=2 SV=3
P52597	Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens OX=9606 GN=HNRNPF PE=1 SV=3
Q60HC3	Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis OX=9541 GN=HNRNPF PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR050666	Family	Epithelial Splicing Regulatory	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13976	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan