Gene detail

Detailed information of ENSDKPP00000022420.1 in Plumapathes pennacea

Genomic Location: :...
NR annotation: KAJ7386269.1, hypothetical protein OS493_010673 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P51128	Retinoic acid receptor RXR-alpha OS=Xenopus laevis OX=8355 GN=rxra PE=1 SV=1
P28701	Retinoic acid receptor RXR-gamma OS=Gallus gallus OX=9031 GN=RXRG PE=2 SV=1
Q6DHP9	Retinoic acid receptor RXR-gamma-B OS=Danio rerio OX=7955 GN=rxrgb PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	ESR-like
Transcription Factors Family	Miscellaneous
Transcription Factors Family	NGFIB-like
Transcription Factors Family	RXR-like
Transcription Factors Family	SF-like
Transcription Factors Family	THR-like

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00104	Hormone_recep	Ligand-binding domain of nuclear hormone receptor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000536	Domain	Nuclear hormone receptor, ligand-binding domain	Interproscan
IPR001728	Family	Thyroid hormone receptor	Interproscan
IPR050200	Family	Nuclear hormone receptor family NR3 subfamily	Interproscan
IPR035500	Homologous_superfamily	Nuclear hormone receptor-like domain superfamily	Interproscan
IPR001723	Family	Nuclear hormone receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48092	KNIRPS-RELATED PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004879	Molecular Function	nuclear receptor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000790	Cellular Component	chromatin	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0034056	Molecular Function	estrogen response element binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08524	RXRA, NR2B1; retinoid X receptor alpha	-	Nuclear receptors	ko03310	deepkoala