Gene detail

Detailed information of ENSDKPP00000023949.1 in Plumapathes pennacea

Genomic Location: :...
NR annotation: KAJ7380959.1, hypothetical protein OS493_004549 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDKPT00000023949

AGATGTTCTCAAAGTGGTTTGGACTACAAACGTCGCTGGTTGCGCTCAAGTATTGCGTGGAGCTCCTATGATTCTTCAGAACTGTCCAAGCCTTCAAGCTTGCCAATTGAACAAACACCTGATCAAGCACTGCGATCCACTGTGAATAAACACTGCAGTGTAGCCAGTTTGTCAGAATCAACTGGTAGCCAGCTTGCAAAAGGAAACTCTGGGAGTTATTCAGCACAAATGACACAGAATAACAATGTGGAGTGGGGTTTTAATGAGAAGGAAAACATGGAGCAAAGAACCAGCTCACAGGTGCATTCATCATTTGCTGTGAGGAAAGAGTTACATGACGTACTTCCAACCAAGTCTATAGTCCCACCACTTAATTTACAGGatGTGGGTAGCTACGAAAGAATCCTGACCTTGATTCGTTCTCAGCGTGAGAGTGATCCTCTGCCCTACCTGTGTTTGCCTGATGAACTTCTTCTCCACATCTTCTCCTACCTGTCACAAGGAATGCTTGTTACTTCCTCTTTGGTTTGTCGACAGTTTTACAGAATTGCCATGGACAATGCACTGTGGCAAACAATAACAATCAGAAAGAAGACATGCTTGACTGATGGCAGCTTGGAGTCCATCGGAAAGCGCCATCCTGCCAGCCTGACAATCTCCTACTGTCACGGGGAGACAGTCACTTCCCAAGGGCTCAGGTCGCTTTTCAGACAGTGTGGAGACACTTTGGAGGAGCTAGACTTCAGTGGCTGCTCTGGTGGTGAGTTGATTGGTGAATCCATCTTGTTACACGTGGCAGCAAGGTGCCCGAAGGTCAAGGTTATTGACGCCAGCTGGAGCAATGTCAGCGACAATGGAGTGCGAGCTTTAGTTGAAAGTGTTAAAAGGTTAGAATGCTTGTGCCTCAATGGCTGCCAGGCTGTCACCGATGGATCCTTAGAAAGCGTCGCAAATAGACACGGAGAGAGCTTGCGCATCTTTGAAGTCTTTGGATGTTTCAACATAACCCCGGCAGGAGTTCATTTGGTGGGTCACAGGTGCCAACATCTCCAGACGCTAAACATTGGACAGTGCCACAAGATCACAGATTCTGCTATTGGTTCAGTGGTGTCAGGCTTGCATGAACTGGAAAATCTGGATCTCAGAGGCTGCAAACAGATCCGGGACACTGCTGTGAAGCAGATAGTTTGCCATTGCTCTCTTCTTACCAGTTTGGTCCTGGCAAACTGCCCCATGATTACAGACACTTCGCTGGCAGAAATTGCAAACAGCCTTCCAGGAATCAGATCGCTGGATATATGCGGCTGTGCTAAAGTGACAGACAATGGGATACGTGCCTTGTCAAGGCGTTGTCATCGTCTTGAGCTTCTTGATCTCAGTTCTACGGGAGTTACAAATAAAAGTGTGACGACCCTGGCAAACTACTGCAGTCAAAGTTTGTGCAGCTTGAAACTGAGCTTTTGTACGGATGTCTCGGATAGTAGTGTGAAAGTTCTGGTAAAGTATTGCAAAAGGCTGACCACTCTGCACCTGTATGGCTGCAAACTTATAAAGGACCCTCGTGCACTCAAGGTTCTCAACAGGAACTTGACGATCGAATGCTGAAGAAAACAGAAGAAACGTTTAAACTTCTCCTTAGACTATGCCAGTCCCTCCCTTTCTGTCTAAAAATCGTGTGTACGAGTGAAATATAAACGCGTTTAAAGCTCCGAGGTCTGGACACGAGCGGCAAAGCGAGGCAGCAGTCTCACCCCCAGACCTTGCCTCGCCGCTCGAGTCCAAACCTCCAATCTCAAACTCGTTCAAGTTTCACTCACGGACGCgatctttggccagaaaaggagggactggcaCAGTTTCGTTTCCACGCAAGAGAATCCTGACGATACCGCGGGATTCAAGGAAACATTCCGGGCGATTTTGTGTTTATTCTACTGTAACTTCCCTAACTTTTTGTTTGGAGCAAAAGTGAGGTCGTTCACGTTCCAAGGCATCAGGAAAAATTGCGTGTATAGGTGTGCTATTGCAACAGCCGTTCAATATACTTTCTTGTTTGCGGCAGACCTGTTGTGAGTATTACCATAATTCTTAAAAtgaatttcattttgaagTAGGAGATCTCGGACTTCGGACCCAGATAAACAATAAGAAAATAGgcaagtaataataattaagtgaaataatatttaaatggTACATGATCTGTACAACATGCGAGTGCATTACCGTGTTTATGCCTGCAACGCTCTTTCCTAATATGGAAGGAAATATTGTTTGAAGAATACTTATTTGGAGACAAGTAAAGTTTTTTCGGAAAACAATTATCGTGGGATATTGCGTATTACTGTGAAGACAAGGAATCCACCATTATGATGTTTTCTGTGGGCCAGGCTTACTTCGCCGTATTCGTCGAAAATTCCTATCACGGAGTCAAAATACCGTATATGATTTTGTCGGGCAGGACTTAGTTTCTCAATCAATCAAGTACACAGGTCTACAAACGTACACGGATTC

Protein

Uniprot

Gene family

Uniprot term	Description
Q9Z0Z3	S-phase kinase-associated protein 2 OS=Mus musculus OX=10090 GN=Skp2 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|F-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF12937	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13318	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0031146	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan