Gene detail

Detailed information of ENSDKPP00000030692.1 in Plumapathes pennacea

Genomic Location: :...
NR annotation: CAH3155259.1, unnamed protein product, partial [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDKPT00000030692

ATGTCCATCTTCCGTGATTGGAAACTCCCCTGGTACATTCTCAAGTCCATCCTACCCAAACAATTACCCAAACTACGAATTTTGTAGCTGGGGCATCACAGTACCACATGGTTACCGTGTGAAAGTGAACTTTGATACATTTGAAACCGAGAGCAACTATGATTACTTGAAGATTTATGACGGCAATTCAAGTTCCAGTACACTGCTGGCTTCCCTCAGCGGTGCTCTTAACGGACAACGTGTTTACTATTCCACTGGGTTATCCATGTGGTTTAGTTTCTCTACAGATGAATCTGTAACAAGAAAAGGATTCCACGCAACATATACACCCGTTCATGGCGTTGCAGGCGCATGTCCATCTTCCGTGATTGGAAACTCCCCTGGTACATTCTCAAGTCCATCCTACCCAAACAATTACCCAAACTACGAATTTTGTAGCTGGGGCATCACAGTACCACATGGTTACCGTGTGAAAGTGAACTTTGATACATTTGAAACCGAGAGCAACTATGATTACTTGAAGATTTATGACGGCAATTCAAGTTCCAGTACACTGCTGGCTTCCCTCAGCGGTGCTCTTAACGGACAACGTGTTTACTATTCCACTGGGTTATCCATGTGGTTTAGTTTCTCTACAGATGAATCTGTAACAAGAAAAGGATTCCACGCAACATATACACCCGTTCATGGCGATGCCTCGTGTTATCCGCCATGTCTCCTGTTTTCCAACCAAACAAATATTATCGCGGTGGATCCAGTGACCTCTACTTCTCAGTCAGTCGTTTCAGGTCTCCCGCTTGCAGGGGCAGTGGATGTACACTTTGATAAGGAGCTCATCTTTTGGGGTGACGTCATTGATCAGACAATCAGCCGAGCGAATATTGATGGAAGCAACGTTTCCACCATCATCAACGTCGGAGGAGAGTGCGAAGGCATAGCCGTGGAGTGGTTGTCTAACCTGCTTTACTGGACTGACGCtactaatgacgtcatagGGGTGGCCTGGTTGGACGGAAGTAATAAACGGATTTTGATTTCTTTGGATCTGGATGAACCACGTGGCTTGGCGGTGGACCCACGAAGAGGCTACATGTTCTGGACTGACTGGGGGAAATCTCCTAAAATTGAGCGTGCGACACTGAATGGCGAAGGAAGAACTCCCATAGTGACGTCAGGAGTTGTCTGGCCTAATGACGTCATCGTTGATTTCTTAACTAACAAACTCTACTGGGTTGATGCCTCTTTGGATAAGATTGAAACTTCTGATTACCAAGGGAACAACCGTTCACAAGTGTTCTCTTTATCTGGTATTCATCCATTTGCCCTGTCGGTTTTTTCCTCTACATTGTATTGGACTGACTGGAAAACTGTAAGGAGCATTCAAAAAATTGACAAGTTGGATGGGACTAGACTTGGTGGCTATAAATTCCCAGGAAAACCATATGGCTTGGCTATGTATGACAAGTCAAGACAACCTGTTGgTTCTAGTGCATGTTCTTCCAACAATGGGGGGTGCAGTCACCTCTGTTTGCTCAAACCAGCGGGATACGTCTGCGCATGTCCCACTGGCGGTGTCCTGAGTAATGCAAAATCTTGCATAGAAAGACCTGCTAAACGTCCCAGTAATGTACGAGGGCATAACACCAGTTCAACAAGTATTCTGGTGCAGTGGGACCAGGCTAATTATACTGTAATTATCCTTGGATACCACATCAAGTACACTAATACGAATGGAGAAAGACTTTCGACATCAGTTAACGGTTCAGCATATAGAAACCTGACTTTGGAGGGGTTGAATGAATTCACAAGCTACAACATCTGTGTTTTGGCTTACACTGCCGAGGGAGATGGTCCAAAGAGTTGCATTTTGGTGTTCACGTCTGAGGATAAACCCGCTCAACCCCCTAGTAATGTACGAGGTCATAACACGGGTTCAACAAGTATTCTGGTGCAGTGGGACGAAGTACCGTATCCTGATCAGAATGGAATCATCCTTGGATACCGCGtcaaatacaataaaagtgGAGAAGAAATTTCAAAAGAATTAAGTGGTTCAGGAAATAGAAAGCAATTGTTGGACGGCTTGAACGAATTCCCAATGTACAAAATCTGTGTGTTGGCTTTCACTGTCAAAGGAGATGGTCCAGAGAATTGCACCTCAGTGGTCACAGCTGAAAATAggtgACATAAGCTTACAATTACTCCAAGATACTAGCAACGCCTCCAATGATCCCGAACAGTGGAAAATACCGCACAGTGCACTCACATTTGAAGCGGAATTGGGCTCGGGTCAGTT

Protein

Uniprot

Uniprot term	Description
A2ARV4	Low-density lipoprotein receptor-related protein 2 OS=Mus musculus OX=10090 GN=Lrp2 PE=1 SV=1
P98164	Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens OX=9606 GN=LRP2 PE=1 SV=3
P98158	Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14670	FXa_inhibition	Coagulation Factor Xa inhibitory site	Domain	Interproscan
PF00058	Ldl_recept_b	Low-density lipoprotein receptor repeat class B	Repeat	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF00431	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000859	Domain	CUB domain	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR050778	Family	Cueball/EGF/LRP/Nidogen	Interproscan
IPR000033	Repeat	LDLR class B repeat	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46513	VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan