Gene detail

Detailed information of ENSDLIP00000001120.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020917298.1, bifunctional glutamate/proline--tRNA ligase [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

ENSDLIT00000001444

ATGCCATACTTACCTCAAGAATCCCACTTGCTACAGGAGGAGAACAAGAAGAAGGAAAAGGGCAACAAGAAAGATCAAGTCGCCACAGCTGCTGCTCAAGTCAAACCAACAGCTTCTCCTGAAGAAGTCGAGAAGCTAACAGCAGAAATCGCTAAGCAAGGAGATAAAATCCGTGAACTGAAAACAAGCGGTGCAGCAAAGGATCAAATAACCGCCGAAGTCGGAGTTCTCCTTCAGCTCAAGAACACTTACAAGACAATGACAGGTGAAGACCTCCCAGCTCCTGGCAAAggaaaacaagataaaaagaaagacaacaaacaaaaaccagCCGAACAAAAACCAGCCAAGCCAACGCCAGCATCTGTTCCTTCCGTGTCTAGTAAAGAGAGTGAGGATCTAAAAGACTGTATTGCAAAGCAAGGTGATAAAGTACGAGAACTAAAGACCTCTGGTGCACCCAAGGACCAAGTAGATGCCGAAGTCAAAGTACTACTGTCactaaaagcaaaatataaaGAACTAACTGGAGAGGACCTAGCACCCGCTGGCAAAggcaaaaaagagaaaaagaaagaaactaaACCACAAGAGAAGAAACCTAaggaacaaaagaaaactgaacAAGCGACAAAACCTGCAGCAgaaggtgatgatggtggtgccGGCAAGAAAATTACGAGGTTAGGTCTGGAAGCGAAGAAGGCAGAGAACCTAAGTGAGTGGTACTCGCAAGTTATCACTAAATCTGAGATGATTGAATACTATGACGTCAGTGGGTGCTATATCTTAAGAGCTTGGTCATACGCGATATGGGAAGTTATTAAAGATTTTTTCGATGGTGAAATTAAGAAGCTTGGAGTTGAAAATGTATACTTCCCAATCTTCGTGTCACAAGCAGCTcttgaaaaagagaaagatcATATCGCTGACTTTGCACCTGAGgtcGCCTGGGTAACGAAATCTGGCCAATCAGAGTTAGCTGAACCTATTGCTATTCGACCAACCAGTGAAACAGTCATGTACCCAGCTTATGCCCGTTGGGTCCAATCTCACCGTGATTTACCTCTCAAGTACAACCAATGGAACAACGTTGTGagATGGGAGTTCAAACACCCTCAACCATTCCTACGTACTCGTGAGTTTCTATGGCAGGAAGGACATACCGCGTACGCTGAGAAAGAAGACGCCTGCAATGAGGTATATACAATTTTGGACTTGTACGCTCAAGTCTACACTGATTTACTCGCTATTCCTGTTGTGAAAGGACGAAAAACGGAGAAGGAAAAGTTCGCTGGAGCTGATTTTACTACCACCGTAGAAGCTTACATATCAGCTAGTGGTCGTGGAATACAGGGCGCAACATCCCATCATTTAGGACAAAATTTCTCTAAAATGTTTGATATCAGTTTTGAGGATCCCGATCCCAGCGTTCAGGAGAGACGTTTTGCTTACCAGAATTCCTGGGGATTAACCACAAGGACGATAGGTGTAATGTGTATGGTTCATGGGGATGATCAAGGTTTAGTACTACCCCCACGGGTGGCCTCTGTTCAGGTTGTAATTGTGCCATGTGGTTTAACAGTCAATCTAGCCGAGGACGAGAAAGAGGTGTTAATGAAGCGTTGTAGTGAATACGAGACGGCATTAAAACAAGCTGGTGTTAGAGTACGGGGTGATTTCCGTGAAAACTACTCACCAGGATGGAAATTCAATCATTGGGAGTTAAAGGGTGTACCAATTCGTATCGAGGTTGGACCGCGTGATGTTAAGAATGACCAGTTTGTCTTGGTAAAACGCGTTGATAAAACAAAGGAGGTTATCAAGAGCGCAGACTTGGTCGGCCATGTTCAGACAACACTCGAGAAAATACACACGGAGATGTTTTCAAAagCACAGGAAGATCTTGACAAACACCTTGGAGTGACGACCAGTTGGCAGGAGTTCTTATCCATGTTAGACAATAAGAAAATCATCCAGGCTCCGTTCTGTGGTAATATACCATGTGAGGATAAGATCAAGAAAGACAGCACAAGGGAGGAGTCTGCCGAGGCAGGAGCACCATCAATGGGAGCTAAAGCATTGTGTATTCCATTCCAACAACCAGCCGAGATCACCGCTAATACTAAATGTGTCCACCCTGAATGTGGACAGGCAGCCAAGTATTACACTCTGTTCGGACGAAGCTATTAA

Transcript

ENSDLIT00000001444

CCATTGTTGCAATTTTTAGTGATATTTTTGAACGGCTTTTCGTGTTTACAGTCCTTGACTGCAAGATATTTTTGATCGGACATTATTTACGTTTTAGTAATGCCATACTTACCTCAAGAATCCCACTTGCTACAGGAGGAGAACAAGAAGAAGGAAAAGGGCAACAAGAAAGATCAAGTCGCCACAGCTGCTGCTCAAGTCAAACCAACAGCTTCTCCTGAAGAAGTCGAGAAGCTAACAGCAGAAATCGCTAAGCAAGGAGATAAAATCCGTGAACTGAAAACAAGCGGTGCAGCAAAGGATCAAATAACCGCCGAAGTCGGAGTTCTCCTTCAGCTCAAGAACACTTACAAGACAATGACAGGTGAAGACCTCCCAGCTCCTGGCAAAggaaaacaagataaaaagaaagacaacaaacaaaaaccagCCGAACAAAAACCAGCCAAGCCAACGCCAGCATCTGTTCCTTCCGTGTCTAGTAAAGAGAGTGAGGATCTAAAAGACTGTATTGCAAAGCAAGGTGATAAAGTACGAGAACTAAAGACCTCTGGTGCACCCAAGGACCAAGTAGATGCCGAAGTCAAAGTACTACTGTCactaaaagcaaaatataaaGAACTAACTGGAGAGGACCTAGCACCCGCTGGCAAAggcaaaaaagagaaaaagaaagaaactaaACCACAAGAGAAGAAACCTAaggaacaaaagaaaactgaacAAGCGACAAAACCTGCAGCAgaaggtgatgatggtggtgccGGCAAGAAAATTACGAGGTTAGGTCTGGAAGCGAAGAAGGCAGAGAACCTAAGTGAGTGGTACTCGCAAGTTATCACTAAATCTGAGATGATTGAATACTATGACGTCAGTGGGTGCTATATCTTAAGAGCTTGGTCATACGCGATATGGGAAGTTATTAAAGATTTTTTCGATGGTGAAATTAAGAAGCTTGGAGTTGAAAATGTATACTTCCCAATCTTCGTGTCACAAGCAGCTcttgaaaaagagaaagatcATATCGCTGACTTTGCACCTGAGgtcGCCTGGGTAACGAAATCTGGCCAATCAGAGTTAGCTGAACCTATTGCTATTCGACCAACCAGTGAAACAGTCATGTACCCAGCTTATGCCCGTTGGGTCCAATCTCACCGTGATTTACCTCTCAAGTACAACCAATGGAACAACGTTGTGagATGGGAGTTCAAACACCCTCAACCATTCCTACGTACTCGTGAGTTTCTATGGCAGGAAGGACATACCGCGTACGCTGAGAAAGAAGACGCCTGCAATGAGGTATATACAATTTTGGACTTGTACGCTCAAGTCTACACTGATTTACTCGCTATTCCTGTTGTGAAAGGACGAAAAACGGAGAAGGAAAAGTTCGCTGGAGCTGATTTTACTACCACCGTAGAAGCTTACATATCAGCTAGTGGTCGTGGAATACAGGGCGCAACATCCCATCATTTAGGACAAAATTTCTCTAAAATGTTTGATATCAGTTTTGAGGATCCCGATCCCAGCGTTCAGGAGAGACGTTTTGCTTACCAGAATTCCTGGGGATTAACCACAAGGACGATAGGTGTAATGTGTATGGTTCATGGGGATGATCAAGGTTTAGTACTACCCCCACGGGTGGCCTCTGTTCAGGTTGTAATTGTGCCATGTGGTTTAACAGTCAATCTAGCCGAGGACGAGAAAGAGGTGTTAATGAAGCGTTGTAGTGAATACGAGACGGCATTAAAACAAGCTGGTGTTAGAGTACGGGGTGATTTCCGTGAAAACTACTCACCAGGATGGAAATTCAATCATTGGGAGTTAAAGGGTGTACCAATTCGTATCGAGGTTGGACCGCGTGATGTTAAGAATGACCAGTTTGTCTTGGTAAAACGCGTTGATAAAACAAAGGAGGTTATCAAGAGCGCAGACTTGGTCGGCCATGTTCAGACAACACTCGAGAAAATACACACGGAGATGTTTTCAAAagCACAGGAAGATCTTGACAAACACCTTGGAGTGACGACCAGTTGGCAGGAGTTCTTATCCATGTTAGACAATAAGAAAATCATCCAGGCTCCGTTCTGTGGTAATATACCATGTGAGGATAAGATCAAGAAAGACAGCACAAGGGAGGAGTCTGCCGAGGCAGGAGCACCATCAATGGGAGCTAAAGCATTGTGTATTCCATTCCAACAACCAGCCGAGATCACCGCTAATACTAAATGTGTCCACCCTGAATGTGGACAGGCAGCCAAGTATTACACTCTGTTCGGACGAAGCTATTAAACACCACTACAATACAGTTAGATGAAATGccaaataatgaaaaacattgaaacaaCAAATTGTCTAAATTAGCagaataaaaacactttccatgATATATTGCCCGTTTGTTTCTACGCCCGTGTGATTGAGTTTTTGTCTGCTTGGTTGCTGGTTTGCTTACTTGTTTGTGTGGTTGTTTCTTTGCTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P28668	Bifunctional glutamate/proline--tRNA ligase OS=Drosophila melanogaster OX=7227 GN=GluProRS PE=1 SV=2
P07814	Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens OX=9606 GN=EPRS1 PE=1 SV=5
Q7SIA2	Bifunctional glutamate/proline--tRNA ligase OS=Cricetulus griseus OX=10029 GN=EPRS1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003201 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09180 all species →	ProRS-C_1	Prolyl-tRNA synthetase, C-terminal	Domain	Interproscan
PF00458 all species →	WHEP-TRS	WHEP-TRS domain	Domain	Interproscan
PF03129 all species →	HGTP_anticodon	Anticodon binding domain	Domain	Interproscan
PF00587 all species →	tRNA-synt_2b	tRNA synthetase class II core domain (G, H, P, S and T)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016061 all species →	Domain	Proline-tRNA ligase, class II, C-terminal	Interproscan
IPR000738 all species →	Domain	WHEP-TRS domain	Interproscan
IPR006195 all species →	Domain	Aminoacyl-tRNA synthetase, class II	Interproscan
IPR002316 all species →	Family	Proline-tRNA ligase, class IIa	Interproscan
IPR017449 all species →	Homologous_superfamily	Prolyl-tRNA synthetase, class II	Interproscan
IPR009068 all species →	Homologous_superfamily	uS15/NS1, RNA-binding domain superfamily	Interproscan
IPR004499 all species →	Family	Proline-tRNA ligase, class IIa, archaeal-type	Interproscan
IPR036621 all species →	Homologous_superfamily	Anticodon-binding domain superfamily	Interproscan
IPR033721 all species →	Domain	Prolyl-tRNA synthetase, catalytic domain	Interproscan
IPR045864 all species →	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR004154 all species →	Domain	Anticodon-binding	Interproscan
IPR002314 all species →	Domain	Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43382 all species →	PROLYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0004827 all species →	Molecular Function	proline-tRNA ligase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006433 all species →	Biological Process	prolyl-tRNA aminoacylation	Interproscan
GO:0004812 all species →	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418 all species →	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0017101 all species →	Cellular Component	aminoacyl-tRNA synthetase multienzyme complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01881	PARS, proS; prolyl-tRNA synthetase	EC:6.1.1.15	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.