Gene detail

Detailed information of ENSDLIP00000001367.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_031568860.1, DNA-directed primase/polymerase protein-like [Actinia tenebrosa]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000001743

GCCATAGACCGTACCCATAAACAGAGACACATTTTGTggatttgtttgtgtttttgtcgACGTTTTGTCTTCAAAATGGTGGATTGAAAAGCATTTGAAATGGAGAAGAAAGATCCTTCTTCTCCAAGATTGCATACATCAAGTTTTTATAGTTCAAAGACTTCCAAAAGCTCCAAAACCTGGCTTGAAAAGCAAGCTAAATGGCAAGCAAAGTGTgaagaatacaagaaaaaaccTATCCCTATACCAAGGCTACTTAGGCTAGACGATCCCATTCCTGTGTTTAAACGTTTCCCTACCCAGCAGCTTGCCTTTGATTTTgcaaaatcaaacaacaagGATGTCCATATATTTTCTGAAGAAATTGATTCAGAAGGAAAAAGAAGATATCTTGTCAGTACTTTTGACGAGTTCTGGCAGTTCTACAGgaagttgaattttgaaaatcgACACTATTATGAAGTAATAATTGAAGGTTCAGCCTGTAAACTATATTTTGACTTGGAATTTAAGAAGGAAttcaacaaagaaaataatggaGTTGAAATGCTTGATATTTGGATAAAGTATATATGTTCTCAAATGAAGCAACACTTTGCAATTATCTGCAATAGAAAACACATTATTGACATGGACTCAAGCACTGATAATAAATTTTCAAGACATCTGATTTTTTGTCTGcctggagctgtttttaaagATAACATCCATGTTGGAAATTTTGTGAATCACATTTGTGCCAGTCTGCTAAATTATGTACATAACTGTGCCGAGGACAGTCAAGGTACCGATGGTCCTGAACCTAAACTACTAAAGATGACTGGAAAACACACTCCTGATGTGTCAGTACAAGATTTAAAGAAACTACTAGTCAAGAACAGCAAAGGAGAAATCAGTACATTTTGTGACCAAGGTGTTTACACCAAGAATCGTAACTTTCGTCTCTTCAAGTCAACcaaatttggtaaaaatgcCTCTTTGGAGATTTCAGAAGAAAACAAGTACAAGCCTGATGTGAACAATAGAAAAGGAAGCTTCAGTCGAGATTATAACTACCTTTTATTTCTTGACTCATTGATTTGTAATGTAAGTCATAGTGATAGCAATAATCATGACGTGAAAATCTTGACCTTTGAATGTGAATCCCAGAAACTTGGAAAACGCACAAGATCACAGGGGAGCACATCTATGTCAGGTTGTCAAGACTCAACTGCATCGGGCTATCAGCAATCTCCATACCCACAGATAGACAGGTTCATCACATCAGTCGTAAATAAGGGTGGGGTTCAAGGAAAAATAAGAAGATGGGCATATTTCTCACAAGCCTGTTGGCCAGTATGTCCGTTCATccgtctgtttgtctgtctgtctgtctgcctgtttgtttgtctgcctgTCCATCCATTTGCCAgcaagatacttatGTTCGATTTAGAGAAGAACAGATGGTGTGAAAATATTGGCAGACAGCACAAGAGCAACCATATCATAATGGTAGCTGACATGAAGCAAGGCGTTTACTATCAAAAATGTCATGATCCTGAATGCAGAAATTTTAAATCACAAGAGAAACTAATACCAGATGAAATAAACCCTTTGAAGCAGCCGAATATTTTGGATGACTCGGGTGTTTGGGAAGACGAGGAAttagatgatgatgttttaTGTCAAGTAGCAACTGAAGTTGAAACTAACGAACAGTTAGCAAAACAACAATTACAAACCAATGACGACGAAAACCAAGAAATCGAACAAAGTATCGCGGATTATCAGCAGCGTAAAGCTCCACAGAGTTTTGACAATGATCAGTATACACAAGaagtaaatattgtaaataaccACGAAAATCAAATTTCTTTCGATGAAAAAGATAGTAAACCAAAGGAAGAccaatatttacatatttcaGATATAAATGAACAAGATGAGCAATTTGAAATTTTCCTGCAAGAAGATGAAACTTGGGAACCGTGGAAAGATCTTCCGATGTGTAACAATCAGAGTTCATGCTAAAGTattttatatgtatatgtattttatataAGTCATTTTATATGAATTCCGTGGACTATGTTGTTTCATCTCAGTGTATACatgcattttaaaatgaagaactgttatgaatgaaaacaaattcatgCGTGAGTCGAAATTTAAATCG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96LW4	DNA-directed primase/polymerase protein OS=Homo sapiens OX=9606 GN=PRIMPOL PE=1 SV=3
Q08DZ8	DNA-directed primase/polymerase protein OS=Bos taurus OX=9913 GN=PRIMPOL PE=2 SV=1
Q32PL8	DNA-directed primase/polymerase protein OS=Danio rerio OX=7955 GN=primpol PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004134 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03121 all species →	Herpes_UL52	Herpesviridae UL52/UL70 DNA primase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044917 all species →	Family	DNA-directed primase/polymerase protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31399 all species →	DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0003896 all species →	Molecular Function	DNA primase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan
GO:0006264 all species →	Biological Process	mitochondrial DNA replication	Interproscan
GO:0009411 all species →	Biological Process	response to UV	Interproscan
GO:0019985 all species →	Biological Process	translesion synthesis	Interproscan
GO:0031297 all species →	Biological Process	replication fork processing	Interproscan
GO:0042276 all species →	Biological Process	error-prone translesion synthesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22761	PRIMPOL; DNA-directed primase/polymerase protein	EC:2.7.7.102 EC:2.7.7.7	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.