Gene detail

Detailed information of ENSDLIP00000003168.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020905333.1, uncharacterized protein LOC110243549 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000003593

atggatggTGAAGACCCTTTCGATAACTTCGACGAAGATGACTTGCAACCGGAGTCCAAAGCGGCGTCCAAGAAAAAGAATGCAAGGTCCAAGAGTACAGACAACATCAGGGTTGTGGAGATGCGGAAGGAGAGGTCCAGAAATGCAGCAAGGAGTAGACGAGGGAAAGAAAATGCTCAGTTTGATGAGCTTGCCAAATTGTTACCTTTGCCTTCAGCCATTACTTCACAGCTTGATAAAGCATCAATTATACGTCTTACTATCAGCTATCTCAGCATGAGGGAGTTTTCTGGAACAGTGCCAAAAGGCCAACTGAAGCTTACTGACTTGTCTGAATCTGGTGTTCCATCTGTTGAAAGTACATTTTCTGATGCTTCTCCATCTCCTCAACCAAGTACAAGTAGAGAAGTTGTAAACTATGAAAGAATTTCAGCAGCCACAAATTTACCTCATTTCCTGTCAGAAACAGGTTCACAACTCTTGCAGGCCCTTGAAGGATTTTTAATGGTTATATCATTAGAAGGCAAGATCCTTTATGTATCAGAAACTGTCTCTATTAATCTTGGTCTATCACAGGTTGAATTGACGGGTAATAGCGTATTCAACTATATACATCAAGAGGACCACCAGGATGTTCTGGAACAACTAAGTAATGCTGCCGAAACACAAAGTGAAGGTTCTTTCCAAGATACACAAGGATTCTTTCAATGTCAGGGTCAGGGAGATACAGGCTTGTTTAACCAAGGTGAACAGCTCAATGGTCCCAAAATTTTGCCTACTCAGCCAAGATCTTTCTTCATAAGAATGAAGTGTACTTTGGTCAGACGTGGTGGGTCTTATGCCAAATCAGCAGGATTTAAAGTTGTTCACTGCGTTGGTCGTGTAAAGGATTATGCAACAGATTCATTTGATTCGGTTAAGAAAGCGTTTGTAGTTCTGGCCCAGCCTGTTCCTACAATGAACATTAATGAACTACCTCTGGAATGTAATATGTTCGTTAGTCGAGTTAACATGGATCTCAAAATAGTCTACTGCGAAGGAAGAATTCATAAGTTCATGGATTACTTTGCTAAGGATATTGTCGGTATTTCTGCTTATGATTTCTATCATGCTGGAGATGTGGCTCTTATCCAAGGACATCATGCCAAGTttCTGTCCAAGGGTCAGGTGTGGACAAGGTATTACCGATGGATGAACAAGAATGGAGGTTGGGTTTGGATGCAAACTAAAGCCTCTCTCATCCCACATCCTTCTAACCCAAGCCTTAAACAAATGTTATGTCTAAACTACATTCTCAGTGATGTGGAACACCGAAGTGTTGTGTTAGGAATGGCTCAGTTACAGGACAAACCAGAACTGACCTCTGCACCAGCTAATATCCTTACTGAAGTTCCATGTGAAGCAGATAATTCTGGCGAACTGAACGATGCCCTCATTGATGACCAAGTCATGGTATTTCCTAAATGGCAAGCTACTTCGGACAAGCTAGTCCCCAAGCAGACACTTCTAGATCAAATGGCATTACAACGTACTGGCTACACAAAACAGTTTAAtgaatcattaaaaaattggTCAAACGAACAGTACTGGATGAATGACCGCAAAAGTAGTCAGTCTGATAGCTGTACTACGGACATAGACCAAGATGATAAAGAACTACAAGAAATTGCGGATATTATCAATGCTGAGGTCACACAGTTTGACCAATCCTTATTAGACTTTGTGGTTTCGGGTAATACACCAGGTTTTACGGAGGTTCCCGCTTCTCATCTAGGACCTCTTGGATCGTACATTGAGGAAATACCTCAAACTACAGCCAGTGCTCCGGCATCATATCCTAAAGTTGAGACTACTACTGTTTTGACTGATTATGCTGCAGCATCGCCATGTGCACAGACCAGTAGAAAACGACCATCAGCAGCAAATAGCTTTGGATATAATGACAATACCGTAGGTAGTAGTACACAACCAAAAGCACCTAGGCTAAGTCATATGGAGGCGGGTTCTTCTAATACTAACACGCGGTATCATCAGGACTTGTTAGCATTTTCTCCCACACCAGGGCAGTATTCCAGTAACAGTCAAACAAACTATAAACAAGCCAGACCATCTCAAAATACATCGCAGATTAAACCAGGGCAAAATCGTAAACCAAAGTCACTGTTGGAACAACTAGTTATGTTGCCAAGTGCAAGTAAAGAGGATGAAGATATATTTAACGATGATTTGATGCTGGAACTTGTGGAAGAGCTAATGGAGAAAAGTGGTGAGGTTTTGCAGGAAAATATGGGTGAAAATAGTAACACGTTTGTATCCCAACTAAATATCAAGCAAGAGGTAGTCACACCAACTTCCACTGATCCACCAGCTCCTTTCTCACAGTTTTATCAGAATTCTCCTCAGCAGTTTAGCAGTAATGATAACCGCAACAGCCACAGGTTGGCTCAGCCAGCTCGTCCACATTCAAATAGCAGTACTCACAGTGAGCCTCCCTTGAGCACTTTCCGCAGTTCACCTGGTCTACGACctcaacagcagcaacaacagtGGGCACAGCCGCAACCCGTGCAACGTTCATGGCAACAGCAGCAGAACAGCTCACCAATGCCTCCACAGTATCAGTTTCCAAACAACCAAGGATCCTCTCAACAACACCAGCCGCAACAGCAACGAGGAAGTGTACAAAACGTacaaaacaagcaacaacaaaaccTTCCACCATACAATCACCCCAGGCAAAatcagcaacagcaacaacgaACACACACATCTTCAGAACTGCAGTCAATAGAAGAGCAGAGTAGAATATTTCGTGAACTTAATGACTTGATAATGAAAAATAGCatacaacaacagcagcagcaacgaCAGCAACAGCAGCAGCGATTACAGCAAAATATAAACCGTGATTCAGTGTATATCTCATCTGCGGCTCTGCCTGAACTAGGAAATATACTTGATGAAGAACTGAACAATCTTAACCAACAAACGAACTCAATGTCAAATCAGAATATGAACGGTAATGTAACAACTGATCGCAAATTTACAGGTATGATGTAG

Transcript

ENSDLIT00000003593

TGCGAGTATCGCACGAAGGACATCCTTGTGTGTTTGAGAGAAGAAGGgtttaatagaaaaaaaactcataTTAATCAACATCGAAATACAGAATCTTGCCAATCTATATTACATTTACGAGTCGAAGATAAGAGGGGACCATTTTACAGAACTGATCAACAGCTGTTTTACGcgaaaacaatcaaaacaaaatggatggTGAAGACCCTTTCGATAACTTCGACGAAGATGACTTGCAACCGGAGTCCAAAGCGGCGTCCAAGAAAAAGAATGCAAGGTCCAAGAGTACAGACAACATCAGGGTTGTGGAGATGCGGAAGGAGAGGTCCAGAAATGCAGCAAGGAGTAGACGAGGGAAAGAAAATGCTCAGTTTGATGAGCTTGCCAAATTGTTACCTTTGCCTTCAGCCATTACTTCACAGCTTGATAAAGCATCAATTATACGTCTTACTATCAGCTATCTCAGCATGAGGGAGTTTTCTGGAACAGTGCCAAAAGGCCAACTGAAGCTTACTGACTTGTCTGAATCTGGTGTTCCATCTGTTGAAAGTACATTTTCTGATGCTTCTCCATCTCCTCAACCAAGTACAAGTAGAGAAGTTGTAAACTATGAAAGAATTTCAGCAGCCACAAATTTACCTCATTTCCTGTCAGAAACAGGTTCACAACTCTTGCAGGCCCTTGAAGGATTTTTAATGGTTATATCATTAGAAGGCAAGATCCTTTATGTATCAGAAACTGTCTCTATTAATCTTGGTCTATCACAGGTTGAATTGACGGGTAATAGCGTATTCAACTATATACATCAAGAGGACCACCAGGATGTTCTGGAACAACTAAGTAATGCTGCCGAAACACAAAGTGAAGGTTCTTTCCAAGATACACAAGGATTCTTTCAATGTCAGGGTCAGGGAGATACAGGCTTGTTTAACCAAGGTGAACAGCTCAATGGTCCCAAAATTTTGCCTACTCAGCCAAGATCTTTCTTCATAAGAATGAAGTGTACTTTGGTCAGACGTGGTGGGTCTTATGCCAAATCAGCAGGATTTAAAGTTGTTCACTGCGTTGGTCGTGTAAAGGATTATGCAACAGATTCATTTGATTCGGTTAAGAAAGCGTTTGTAGTTCTGGCCCAGCCTGTTCCTACAATGAACATTAATGAACTACCTCTGGAATGTAATATGTTCGTTAGTCGAGTTAACATGGATCTCAAAATAGTCTACTGCGAAGGAAGAATTCATAAGTTCATGGATTACTTTGCTAAGGATATTGTCGGTATTTCTGCTTATGATTTCTATCATGCTGGAGATGTGGCTCTTATCCAAGGACATCATGCCAAGTttCTGTCCAAGGGTCAGGTGTGGACAAGGTATTACCGATGGATGAACAAGAATGGAGGTTGGGTTTGGATGCAAACTAAAGCCTCTCTCATCCCACATCCTTCTAACCCAAGCCTTAAACAAATGTTATGTCTAAACTACATTCTCAGTGATGTGGAACACCGAAGTGTTGTGTTAGGAATGGCTCAGTTACAGGACAAACCAGAACTGACCTCTGCACCAGCTAATATCCTTACTGAAGTTCCATGTGAAGCAGATAATTCTGGCGAACTGAACGATGCCCTCATTGATGACCAAGTCATGGTATTTCCTAAATGGCAAGCTACTTCGGACAAGCTAGTCCCCAAGCAGACACTTCTAGATCAAATGGCATTACAACGTACTGGCTACACAAAACAGTTTAAtgaatcattaaaaaattggTCAAACGAACAGTACTGGATGAATGACCGCAAAAGTAGTCAGTCTGATAGCTGTACTACGGACATAGACCAAGATGATAAAGAACTACAAGAAATTGCGGATATTATCAATGCTGAGGTCACACAGTTTGACCAATCCTTATTAGACTTTGTGGTTTCGGGTAATACACCAGGTTTTACGGAGGTTCCCGCTTCTCATCTAGGACCTCTTGGATCGTACATTGAGGAAATACCTCAAACTACAGCCAGTGCTCCGGCATCATATCCTAAAGTTGAGACTACTACTGTTTTGACTGATTATGCTGCAGCATCGCCATGTGCACAGACCAGTAGAAAACGACCATCAGCAGCAAATAGCTTTGGATATAATGACAATACCGTAGGTAGTAGTACACAACCAAAAGCACCTAGGCTAAGTCATATGGAGGCGGGTTCTTCTAATACTAACACGCGGTATCATCAGGACTTGTTAGCATTTTCTCCCACACCAGGGCAGTATTCCAGTAACAGTCAAACAAACTATAAACAAGCCAGACCATCTCAAAATACATCGCAGATTAAACCAGGGCAAAATCGTAAACCAAAGTCACTGTTGGAACAACTAGTTATGTTGCCAAGTGCAAGTAAAGAGGATGAAGATATATTTAACGATGATTTGATGCTGGAACTTGTGGAAGAGCTAATGGAGAAAAGTGGTGAGGTTTTGCAGGAAAATATGGGTGAAAATAGTAACACGTTTGTATCCCAACTAAATATCAAGCAAGAGGTAGTCACACCAACTTCCACTGATCCACCAGCTCCTTTCTCACAGTTTTATCAGAATTCTCCTCAGCAGTTTAGCAGTAATGATAACCGCAACAGCCACAGGTTGGCTCAGCCAGCTCGTCCACATTCAAATAGCAGTACTCACAGTGAGCCTCCCTTGAGCACTTTCCGCAGTTCACCTGGTCTACGACctcaacagcagcaacaacagtGGGCACAGCCGCAACCCGTGCAACGTTCATGGCAACAGCAGCAGAACAGCTCACCAATGCCTCCACAGTATCAGTTTCCAAACAACCAAGGATCCTCTCAACAACACCAGCCGCAACAGCAACGAGGAAGTGTACAAAACGTacaaaacaagcaacaacaaaaccTTCCACCATACAATCACCCCAGGCAAAatcagcaacagcaacaacgaACACACACATCTTCAGAACTGCAGTCAATAGAAGAGCAGAGTAGAATATTTCGTGAACTTAATGACTTGATAATGAAAAATAGCatacaacaacagcagcagcaacgaCAGCAACAGCAGCAGCGATTACAGCAAAATATAAACCGTGATTCAGTGTATATCTCATCTGCGGCTCTGCCTGAACTAGGAAATATACTTGATGAAGAACTGAACAATCTTAACCAACAAACGAACTCAATGTCAAATCAGAATATGAACGGTAATGTAACAACTGATCGCAAATTTACAGGTATGATGTAGCTGTTTATTTTAGCCTCTGTAGCTTTGTGCTTGGTGGCTGTGTGTCCTGACACATGCAGCCATTAAGTACAGATCTACGTagactgtttgtttgttgtataaAGTCCAAagaattgtaattatttacatatattgaTAAATCTTAAAAGATAACAATCACTGGATCCAAGTACAGTTATTGTAAAGTAAATTAATGTAAAAAGCAATAACTGCAGTATAATTTGAATAGCTATTGTTCAGAACTGAGCATATTGATCACATTGTGATTCTATGAGAAGTAAACCTCGCCTTAATGGTTTTGCACTTTAAGGTGTATATgtggcgagccagcccggtttaacgggctggtttcttttgtgttcaagctatcagcgtaaaaacaaaagaaaccagcccgcttgaccgggctggctcgcctcatataaacagtgCCTGAGTATCTTTACATGGAGCTGAACAAAAGTTAGCTAGAACTTCTATATTAACCTGTGACATTTCCACGTCAACTGTAAGAATTGGTGAGCATAGGTTTTCCATTGAGAAGAAGGGTTGCTTTaaaaacttataaaaaaacttgtaaaaataatatagCCTATCTCTTAATAGCATAACTGCTAgattaatgatatttttatccaTAAGGTTTTTGTATATCacattctttattttttttaaatctgttttgttttattctctTGGCGAAATTTTGTCACGTGTGGTACTGCTacaggaggggaggggggtgtAAAGGGACTTGAATACCGCattgaaaaatgtcaaattacCGAATACTGCAGCCTAAAGCTAGCAAAATACCGATACGACAGcgaaaatgtttaaaatagcTGTTTCAACCAAAACATTCTGCTTTCTCTTCGAAGCTGAGAAGGTTCTGCGTTCAAGAATAGCAAAATACCGAAATGACGCACTGAAAGTTGCCTTAAAACTACAAGTCCTTGCGCCCCCCTCTTACTAGTTTAGTGTAACGTTGCTTGTGTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IXF0	Neuronal PAS domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NPAS3 PE=1 SV=1
Q9QZQ0	Neuronal PAS domain-containing protein 3 OS=Mus musculus OX=10090 GN=Npas3 PE=1 SV=1
Q99742	Neuronal PAS domain-containing protein 1 OS=Homo sapiens OX=9606 GN=NPAS1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005333 (this species only)
Transcription factor family	bHLH · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14598 all species →	PAS_11	PAS domain	Domain	Interproscan
PF00010 all species →	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan
PF00989 all species →	PAS	PAS fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035965 all species →	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR000014 all species →	Domain	PAS domain	Interproscan
IPR036638 all species →	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR011598 all species →	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR013767 all species →	Domain	PAS fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23043 all species →	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09098	NPAS1_3; neuronal PAS domain-containing protein 1/3	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.