Detailed information of ENSDLIP00000004530.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020902403.1, E3 ubiquitin-protein ligase RNF168-like, partial [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7T308E3 ubiquitin-protein ligase rnf168 OS=Danio rerio OX=7955 GN=rnf168 PE=2 SV=1
B0BLU1E3 ubiquitin-protein ligase rnf168 OS=Xenopus tropicalis OX=8364 GN=rnf168 PE=2 SV=1
Q6INS5E3 ubiquitin-protein ligase rnf168 OS=Xenopus laevis OX=8355 GN=rnf168 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007018 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097
all species →		zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051657
all species →		FamilyRNF168/RNF169 E3 ubiquitin-protein ligaseInterproscan
IPR018957
all species →		DomainZinc finger, C3HC4 RING-typeInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23328
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan
GO:0031491
all species →		Molecular Functionnucleosome bindingInterproscan
GO:0035861
all species →		Cellular Componentsite of double-strand breakInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSDLIP00000004530.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP