Gene detail

Detailed information of ENSDLIP00000004598.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: KXJ24578.1, Zinc finger protein 84 [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

ENSDLIT00000005038

ATGGTTTATCGTAATCCagtaatttacaaagaatTGCGTACTGTTGCCATACAGACAGATGATAATGGATGTAACAATGGATGTACATCTATGTACATTAATAGAGATTCAATTCAGGTTCCTAGTTCCTCAGATTCTGCACTACCTTCATGGGCAAGTGGTTTAGATGTTGAAAGTACCTCTAATAGTGAACCTGCTCCAGAGAATTCCTTTCAACAAGAAACAGAGGCAACAATGGTCCTGGAATATACCCCAGAAAATAATTTGGCGAATAATACGAATGATCATACAAACTATGATGATTATAGCTCTGGGAGTACTTTGAGTGATACTTGTAAAAATGAAGGGCATTATGATTATGACTACGGTAGATTCAGTAACTGTGATTTTGCTATTGTAGAAGATAACAACAATGatatacattcaaaatcacaATCTGGAGAAAAATCCTTCAACTGTCCTGTTTGCGATAAGAAGTTTACACGGAAGGGGAATTTAACAAGACATATGTTGATCCATCTTGgattaaaatcatttgaatGCAGAAATGAATCTAAACCCTTGGAATGCACTGTTTGTAAAAAGACATTGTCCAGTCAAAACAACCTAAAGAAACACTTATTAATACACATTGGAGTGAGACCTTTTGGATGCACCATTTGTCACAAGATATTCACCCACAAGTCTGCTCTGCTCATACATGAAAGAACACACTCTGGAGCAAAATCCTTTGAATGTCCCCTTTGCAATAAGATGTTTACACTAGAAGGCAAAATGCGTGCACACGCATTCACACATGTCAAATCATTTGAATGTTCTGTCTGCAAGAAAAGGTTTAATAAGGAAAGCAAGCTGCAGGCACATGCCAATGTACACAGTGAACCAATTGCTTGTTCCATCTGTAATAAGAGGTTTGAAGACAAGAGTCATTTACTGAAACATGCTCACGATCATATTGATCAAACTAAACCCATCAAATGCACCGTTTGCATGAGAGAGTTTGCTAGTCAACAAAACTTAAAAAGACATTTGTTGACCCACATGGGTGTGAAAGCTTTTGAGTGCACAATTTGTCACAAGACATTTTCGCAAAAGACAACTTTGCTCTCACATGCTAACTTACACTCTAGAGAAAAAATCTTTGAATGTCCTACTTGCAATAAGACATTTACTCAAGAAAGCTCTTTGCACGCACATGCATTAACACATGCTAGATCCTTTGAATGTTCTGTTTGCAAAAAAAGCTTTGATAAGGAGAGCACTCTGCTGGCACATGCCAACGTACACTCTAAACCGATTGAGTGTTCTATTTGTAACAAGAAATTCAAAGATAAAAGTCATCTGCTGAAACATGCTAGAGAGCATGTTGACCAAGAGAATCCCTTGGAGTGCTCTCTTTGTACGAAGGAGTTTTCTAGTCCACAAAACTTAAAAAGACACATCTTGATACATGTTGGAGTCAAACCTTTTGAATGCACTGTTTGCCATAAAACATTTACACAAAAGTCAACTCTACTTGAGCATGCAAACACACACACTGGAGAAAAAACCTTCGCATGTCATGTTTGCAATAAGAAGTTTGCGCAAAAAAGTGGTCTGCGTTCACATACTTATTTACATGGTACATCCTTTAAATGTCCTGTTTGCAAGAAGCGCTTTATTAAGAAGAGCAGTCTCGAAGTTGATCTTGATGGTGGAAATTCCAATGATAATCTAGAGGACATAAATCAAGATGCCAATGAAGATGCTGAAATCCGAAGAGCATATTTAGAGAAAATTGAGTTTTCTATTTCTACAGTTGGTGAATTGGATGTCAAGAACAATGCAAATGGTGGCCGGAAAGAAGATCAAGGCTCCGTTGATGTTACAATTGTCAAAAAAGAGATTGAATCAACAGACGATAGCCAGTCCAACCAGAAGCAAGTATTTGAATGCTGCTACTGCAAAATGAAATTCAGTCAAGATTCCGAGTGGAGCAAACATATTAGGAttatgcattttggtgggaaACCACTCAAGACATCAGCTCAACAGACTCTCAATCCTCACACCCAGAAGAATCGCTTTGAATGTTCTATTTGTAGAAAAGTCTTTTTTGACAATAGGTCATTGCATAAGCATCATTTAGCTCATTTAGGGGTGCATGCTAAACCATTTGAGTGCTCTTTTTGCAAGGAGACCTTttcaaaaaagaatgaattgaGTGCCCATCTTAACACACACAGACAGGGTAACAGCTTTAAATGTTCCATCTGTGAGAAAGAGTTTGTGTGCTATGGTTCATGGCGTAAACATCGTTTGGTTCATTCACAGGAAAAACCTTTTCCATGCACTGTTTGTAATCAACGATTTACTATCAAGTGTAATTTGAAAAGACATATGTTAATCCATCTTGATTTaaaaccatttgaatgcaaagtCTGCCATAAGGCATTTAGACAAAAGTCTACTCTCATCACACATTCACAAATCCATTCTGGAAAAAAACCTTATGAATGCTCTATTTGTAAGAAGAAGTTTACACAACGAGGAAGCCTGAAAGTACACTCATCTACACATGCTAAATCATTCAAATGTTCTGTCTGCAATAAGAAGTTTACAGAGGAGAGCAGTCTGCTTGAGCATATTAACAAACACACTGAATGCACTAAACAATTTGAGTGTTCTGTCTGCAACATGAAGTTTGATGATAAGAACAGTCTCTGCAAGCATGCTAATGTGCATGTTAGTAAAGATATCACTGAATGCACCATATGTAGGAGGAACTTTTCAAGTCAAACAAACTTGAAACGACATATGTTAATACACCTTGGAGTAAAACCCTTTGAATGCACTATTTGTCAAAAGAGCTTTACACAAAAGAGCACTTTGAATACACATTTCAGAACACATTCTGATGCTAAACAAAAGTACTGA

Transcript

ENSDLIT00000005038

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0062097 (this species only)
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF13912 all species →	zf-C2H2_6	C2H2-type zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR003604 all species →	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan
IPR050752 all species →	Family	C2H2-type zinc-finger domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24384 all species →	FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.