Gene detail

Detailed information of ENSDLIP00000004794.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020902666.1, succinate dehydrogenase cytochrome b560 subunit, mitochondrial [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P70097	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial OS=Cricetulus griseus OX=10029 GN=SDHC PE=2 SV=1
P92506	Succinate dehydrogenase [ubiquinone] cytochrome b large subunit, mitochondrial OS=Ascaris suum OX=6253 GN=SDHC PE=1 SV=2
P41955	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial OS=Caenorhabditis briggsae OX=6238 GN=mev-1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007266 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01127 all species →	Sdh_cyt	Succinate dehydrogenase/Fumarate reductase transmembrane subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018495 all species →	Conserved_site	Succinate dehydrogenase, cytochrome b subunit, conserved site	Interproscan
IPR014314 all species →	Family	Succinate dehydrogenase, cytochrome b556 subunit	Interproscan
IPR000701 all species →	Family	Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit	Interproscan
IPR034804 all species →	Homologous_superfamily	Fumarate reductase/succinate dehydrogenase, transmembrane subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10978 all species →	SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006099 all species →	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0009055 all species →	Molecular Function	electron transfer activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005749 all species →	Cellular Component	obsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	Interproscan
GO:0006121 all species →	Biological Process	mitochondrial electron transport, succinate to ubiquinone	Interproscan
GO:0045281 all species →	Cellular Component	obsolete succinate dehydrogenase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00236	SDHC, SDH3; succinate dehydrogenase (ubiquinone) cytochrome b560 subunit	-	Non-alcoholic fatty liver disease	ko04932	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.