Gene detail

Detailed information of ENSDLIP00000005065.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020894245.1, LOW QUALITY PROTEIN: ankyrin repeat and IBR domain-containing protein 1-like [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000005510

AAAAGAATGACTACctattgaattaaaaaaaaaattaaaaagacatGAATATTTGCATAATATATGTCAATCAAGCCGACATTTTAGGATATGAATTGCAGAATAGAGGGTATTTAGTGTTTCAGTGAAGGAAAACGTTTTTCAGTAGAAACGACACAAGTATGTAAATCGGAAACGATTGAGCAAATAGTATCCAAGGAGATGGCAAGACGGTATTTACAGAACGATATTAATGCATTCGTGGAATCTAATCCGAACATTAAATGGTGCCCGGCCCAGGGGTGTGGTCGTGCTGTGCGATTACCTCCAATAGCATCGCCATCCAGTGCTGTTAGTTCTCTCACACAAAGACGACTAGCAGATACTGACTGTATGGTGGTAGACTGTGGTAGTGGTCATTACTTTTGCTGGCATTGTATGCAAGAACCTCATACGCCATGTACGTGTGAATTATGGGAAAGGTGGTCTCTAAAGATAGCCGAGATGTTACCACAGATACCTGGTTTAAATCAGCAACAGGgtttAGATGAATGTCCAGAAACTGAAAGAGTTGCAAACACGCTTTGGTTGGTAACAAACTCGAAACATTGCCCAAATTGCAAGTCACCAATACAAAAGACCGAAGGATGTAATCATATGAAATGTACTAAGTGTAAACATGAATTCTGTTGGGTTTGCTTGGAACTTTGGAAGAAGCACAGCTCAGCGACAGGGGGTTATTTCAGGTGCAATAGGTACGATGTGATACGCAAGCTAAATATCGACTGTGTGGACAAGATACGGCAGGCATCGGCAGAGAACATGAAAATACAGAAACTTAATTACTTTTTACATTATTACTCTCGATTTAAGAACCACGAAAACAGCTTTAAGCTCGAGGAGCCGCTTCTTGGTGCAGCAAAAGAGAAAATGACAGCACTCGCCCTTTCTGCTGCAGAAAACGacgCATCTTTGGATGGTGTTGACACCAAGTTTGTAGAAGAAGCCGTACGGGAGTTATTAGAAGCTAGACGAGTTCTAAAATCATCTTATGTTTATGGTTTTTTCCTGGATGgtaacaaagaaaagaaaacgatATTTGAATTAATGCAGACTGAAGTGGAAGAGGTCACAGAAAGTTTATCGCAGATGGTAGCGCGTCCTTATCTTCACACACCACGATCAAAGATTATCCAAGCCACAGCTTTCCTACGAAATAAAAGGCAGACTTTCTTATTGGCCTTATCACGTGGTCTTATACCAGATGAAGAATTACCAAAACCTTTAGTGTCAAGGTTGGAGTTACTTACCAAACCACAAGTATCATCTGATGACGAGTCCGATGAAAGTGAAGACAATTACAGTGAAATACGTCGAGTGATCGAGTCTTCGATCAGACAACAGCTGACTGGATTAGATACAAGCTCACCTGAGAGCAGTCCTAGTTCAGGCTTTCTTGGAATGTGTGCTAGAAGTGGGTGCCCTAACCCTCGTATTAATACTGAATATGCAGGTCCTGGCCAACTATCGTACTATTGCTGTTATGACTGTTTACGTATTGACatgagaaataaaaaacgaAGGAGAAAAAAGCGAGAACAAAAAATGGAGCAGAAGATGAAACAAGCCGAGAAAATGTCCTTGCCTGTACCTAAGATGGAGGATAACCCATTAGAATTGGACTTAGATCTAATGCGAGCTATCCAATTATCGCTTGACCAACAAGCTTGCAGTAGTTCAACACCAGACAGTGATAGATATAGTAAACACCATCGCATGTCTTCATCTAGTAGTTCAGCGTCTGGAGAAGACGACCCTGTTACTGAAAATGTCCAAGATATAGAAGATGATGAAACCTCGCTACAGAGAGCCCTAGAATTATCATATAGCAATATGGTCAAAGAAACTCCTCCTCCTCAAGATGATGAACTGAGAAGAGCCATAGCATTGAGTCTTGAAGAAGATACCTCACCGTCATTACCAAGCCAGGAGAAAGATGGCGAGTACAGACAACTGTAACTAGACTCATTACGCTATTGCATCGCTGTTGACTCTGCTAGAACTTAAGTTCCAGTCGTGGGGCTTGTGGCAATTTAGAAGGGGAGAAAGcatgaaaaaatgaagttGGATTCAGTAAATACCAGTGACTGTTTGTGGACATGCGTTGCTGTTTATCTAACAGAAGGAAGACATATAAAGTCAAGCCAATTTGATAATAACTCTGCACTATTTCATCGCCATATCGCTTGTTCTTCCTCCGTGtcaccacaggtagcccaaaatAAAGAATTAAACTGTGGAAAACTTACGTCATTGGTTAGCCAGTTCTTTGTAGAAATTAAATTTAGATCCTGCAGCTGGCCAAATATGATGCGAGGGGGAGTCAGTATAGAGACAGGTTTTGGCATGGTCACTATGAACTGGTTTATGTTGTTTAATACTCAGTTATTTCAAACGAATGTattaatgtataaatgaaCCGATCGAGTTCTAATCCTCCCCGTTGCAAAACTGAATTTGTTATACAGCTCGTTTTGTTTCgattatttgttgttatcacaatagtttatatttttgtagaCAAATGTTTCCTGGGAATATTATgtgctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttgtcatGGTAGTTAACATGTAGTGTTAAAGTAGTGTTAAAGTATCTATAGAGTGTACGcaccaaaagtgtgcaacttgaaataccactaaatagtgctattttatgctaattctattgttttgtttaattagtgctatttaatactaaatagtgacaactgttgcacac

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9P2G1	Ankyrin repeat and IBR domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ANKIB1 PE=1 SV=3
Q6ZPS6	Ankyrin repeat and IBR domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ankib1 PE=1 SV=2
Q1L8G6	Ankyrin repeat and IBR domain-containing protein 1 OS=Danio rerio OX=7955 GN=ankib1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006522 (this species only)
Ubiquitin family	E3\|E3 activity\|RBR · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01485 all species →	IBR	IBR domain, a half RING-finger domain	Domain	Interproscan
PF19422 all species →	Ariadne	Ariadne domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003903 all species →	Conserved_site	Ubiquitin interacting motif	Interproscan
IPR002867 all species →	Domain	IBR domain	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR045840 all species →	Domain	Ariadne domain	Interproscan
IPR031127 all species →	Family	E3 ubiquitin ligase RBR family	Interproscan
IPR047564 all species →	Domain	Ankyrin repeat and IBR domain-containing protein 1, Rcat domain	Interproscan
IPR044066 all species →	Domain	TRIAD supradomain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11685 all species →	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000151 all species →	Cellular Component	ubiquitin ligase complex	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0031624 all species →	Molecular Function	ubiquitin conjugating enzyme binding	Interproscan
GO:0032436 all species →	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000005065.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.