Detailed information of ENSDLIP00000005444.1 in Diadumene lineata

Genomic Location: chr10:3687260...3692242
NR annotation: XP_020892335.1, LIM domain-binding protein 2 isoform X4 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9W676LIM domain-binding protein 2 OS=Gallus gallus OX=9031 GN=LDB2 PE=2 SV=1
O43679LIM domain-binding protein 2 OS=Homo sapiens OX=9606 GN=LDB2 PE=1 SV=1
O55203LIM domain-binding protein 2 OS=Mus musculus OX=10090 GN=Ldb2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001836 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17916
all species →		LIDLIM interaction domain (LID)DomainInterproscan
PF01803
all species →		LIM_bindLIM-domain binding proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041363
all species →		DomainLIM interaction domainInterproscan
IPR029005
all species →		FamilyLIM-domain binding protein/SEUSSInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10378
all species →		LIM DOMAIN-BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005667
all species →		Cellular Componenttranscription regulator complexInterproscan
GO:0007399
all species →		Biological Processnervous system developmentInterproscan
GO:0030274
all species →		Molecular FunctionLIM domain bindingInterproscan
GO:0045944
all species →		Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSDLIP00000005444.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP