Gene detail

Detailed information of ENSDLIP00000005510.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020896492.1, SET and MYND domain-containing protein 4-like [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

ENSDLIT00000005959

ATGGTTGACacaaataatgattttattcaACATAACTTGTACGAAAAAGTCTGTGACAAACTCAAAGACAGCAACAACTTAGAAAGGTTGTCTGTTCAGTTTGGTTGCCTCAAGACAGATGAGCAAAGAGTTAGATTTGTTTTGGAGCTTAATATCATTGAAGAAGTTGTTAAAATCCAGCCAAGTTTTATCCCTAAGTCATCCAGCAAATCAAATGATTTCAGATCAGAAGGGAATGCATTGTTCAAAAGGAAGCGTTTCAGAGAATCTTTGGAAAAATACAACCAGAGTATACTACACTCTCCACCAGATGATCAAAAATCTTCTTCTCTTGCATATGCCAATAGATCAGCCgttctttttcatttaaaagAGTATGAACTTTGTATTCGAGATATCCAGATATCTCTTGAAAATAATTATCCTGAGGAGTTTCATTATAAGATTCTTGATCGCCAAGGAAGATGTTGCCAATTTTTAGGAAAGACAGCCGAAGCTCAGTCAGCATTTACCAAAGCTATGGAGAGCATTGAGGAATCTAATCTAAAGGGGAAGGATAAGACAACATGGAGGAAAGACTTAGAGAAAAAGTTAAGAGACCCttgtaaagaaataaataattgctTGCAGATGAAACAACTTGATTTTATAAGATCAGGTTTTTCTGCTTTGCCTGAACTACCTAGTGCAAATGCCAAGTATATAGCAACATCAAAAGCATTCAATGTTGCAACATCACCTGATAAAGGACGATATCCTGTCGCAGCCCAAGACATTGACGTAGGAGAAGCCTTAGTTGTAGAGAAGCCATTTGCTTCAGTTTTGCTTCAAGAATGCGAAAATACTCATTGCCATCACTGTCTCAAGAGATGTCTAACTCCTTTGCCTTGCAAGCAGTGCTCAAATGTTAGATATTGCAGTCTTGAATGTGCAACAAAAAGCTGGGAACAGTACCATGCACATGAGTGCAGATACTTGCACCACATCACTAGAGCTGGTAAATATGGTCATCTTGCTTTAAGAACTCTACTCAAAGCTGGGCTAAGTTTGATTTGCGATGGTAGCAGTTTAAGTAATGACTTTGAAATGCTAGGATTGAATATTGGCGGGAGATATGATCCGTCTGATTACCGTAATATTTATAACTTAGTTGGCCATACAGAATCAAGGACAGTTGGAGATTTATTCAGACGTGCAGTTATCGCTGTGTATTTACTAAAGTGCGTTCAGAATACAGATTTCTTAGTAGGGAAAACTggaaatgatggtgatgagttTGTCAAAGCTGGTGGTATTATACTTAGGCATCTGCAAAGCTTCCCTTGTAATGCTCATGAAATATCTGAACTAGAACTTTCACTAGAGTCAGTGGAAACATCAGTTACCATGGAGATTGGAGCCGGTATCTATGCAACATTAAGTCTGTTTAATCATTCATGTGATCCCAGTGTTACTAGGTTTTTCTATGGTGATACTTGTGTTGTGCGTGCTCTTAGAGGCATTACCACTGGTCAAGAGATTGCAGACAACTATGGTGTGCTCTCAGCATTGACACCATGGAATGAGCGTAGAAAAATACTTGCAAGTCAGTATTACTTTGATTGCAACTGCGAGGCTTGCACACAAGATGCACCTTTGTTTAGAGATATTGCATTAATATTGACACCCACTTTACGATGTGGTAGTTGTGGATCTGCTTTACAGCCTAGCAGTGAGCAGTATATTATCTGTCAAACCTGCAAGGCAGGTCAAGACATCAGCTTAAAGACAAAATTGTTGAACAAGTCAGAAGAGAGGTTGAAGCAAGCAATTGATAAGCTATTCCATGGAGATGTTGCCAACTCTCTCCCTCAGATACAGAGTCATTTGAGGATATTAGAAAAGAATGTTGTCCCTCCTTGGCATGGAAGTAGACCAATTTGCCTGTCTGGGGTGATGTGGGaagatttgtcaaaaaatctgcattttgtgacTGAAGACAATGACGGAAAAGACGACAAACATGGCCCAATTTTAAACTCGGGTATTCCTTTGGAAGCCCAAGTAATTAAGGCTGTCTCTCACTTGTGA

Transcript

ENSDLIT00000005959

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BTK5	Protein-lysine N-methyltransferase SMYD4 OS=Mus musculus OX=10090 GN=Smyd4 PE=2 SV=2
Q5F3V0	Protein-lysine N-methyltransferase SMYD4 OS=Gallus gallus OX=9031 GN=SMYD4 PE=2 SV=1
Q5R5X9	Protein-lysine N-methyltransferase SMYD4 OS=Pongo abelii OX=9601 GN=SMYD4 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005305 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01753 all species →	zf-MYND	MYND finger	Domain	Interproscan
PF00856 all species →	SET	SET domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002893 all species →	Domain	Zinc finger, MYND-type	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR052097 all species →	Family	SET and MYND domain-containing protein	Interproscan
IPR044421 all species →	Domain	SMYD4, SET domain	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46165 all species →	SET AND MYND DOMAIN-CONTAINING PROTEIN 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0042826 all species →	Molecular Function	histone deacetylase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24634	SMYD4, ZMYND21; SET and MYND domain-containing protein 4	EC:2.1.1.-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.