Gene detail

Detailed information of ENSDLIP00000006807.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020916056.1, uncharacterized protein LOC110253483 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000007358

AAGCCAATCAAATTCTTCcttatgtttgtatttttatggATATCAGCTGTTGTTATAAATCGCAGGCGCTAAGTCAAATTATTGAGCCTGCGATTCAAAATGGAGGTCGCTTtgGAGTCCTTGAAAAACACTGCAGATTCCAGCAAAGTCGAGCCTGCTTTGAAATTGTTAAAAACgtattttgataatatttcaaaagatcCACAGAATCCTAAATACAGGAAGATACGAATTGgtAATCCAAAGTTTAATGCAACAATATGGGAAATTGAAGAGGCCAGAACATTTTTACTTCTTGTAGGATTTGAGCAGAATGGTGATTTTTTAACACTACCTGATCACATTGGTATTGATACAGCAAAACTGCTGATTGAAAGCTGTTTAGGGTCATCTCAAACTACGACAAGCCAACAACATATACCACCAACATCCAACAATGAAAAAACACAGTCTTCAACACTAAAACTGGCCCCAACAAAAGGTGGTAGTTATTTTGATCAAGAAATAAAAGCCAATCTTACACTCCTGTCTTATATGGTTGAAATGGGGTTTGACAAAAGTTCTTCTGAGCAAGCATTGATTGCAACTAAGAATGCTGGAGTGCAACCTGCAATGGATTGGCTTGCAACAAATTTCCATTTATTGCACCAGAATAAGAATGTAGCTAACACTGTTAACAGTAATGACAGTACCATGCCGTCAACAAGCACAGGTCTTGATGTCACTTCCGATGCAAGGCCTGCCCCAGTTTCACGTTATCAGAAAACTGCAGATGAAAGACACAAGTTTCAGGAGAAACTTAGACTAGAGGCTATAGAAACGGCAAGGGCTGAAAGAATAGCAAAACAGCAACACAAAGAATTTTTGTTGAAAGAAATGCAATCAGAGAAGGAAGAGAAGAAAGAAATGAATGAGATGTCCAAAAAACTCAAAACCTTGGCTCAAACATCAGAAGGCTTGTGTAGCACTGAAACCATGAGTGTTGATAGAGAACAGTCAGAAAATGATGTGGATCATAAACCACAAGACCAGAAAACAGAACTGAAAATCAGACTACCTGATGGAATGGTAACAGATCTTACACTTCCAAATGGTTCACTCATCAAACAGTTATATAGACATATTGCAAGGTTGAAAGAGATggatgaaaatgaatttacTATCATGACCATGTATCCGCAAACTGAACTGACAGACATGACAATGACCTTAACCACAGCAGGTTTAAACCCAAGGGCTACTCTTGTTGTGCAAAGAAAAGATCAACTTGGTATGGTTACAGAAGGACATGGCAAAGTTTGTACTGTTAAAACTATAACCAGTCTGGATGAATGGCAGGCTCTGATCACCAATAACAATGACAAACTAGTAGTTGTGGAATTCATCGCCTCTTGGTGTGCCAATTGTAGAAGTGTAGAGGATAGATTTGAAACTCTCAATGGTCAATATGGTATTGGACAAGCTGTTATCTTTGCTCGTGTTGATGTGGACCAACTTAAggttttgaaatatcaaatgcaCATTTCTACTCTACCAACTTTCAAGCTTTATTGGAATGAAAATGAGGTCATAACAGTTGAAGGCACAAATATGGAAGAACTTgaagaacaaatcaaaacaaaccaaCATGGACCAGATGAAACACAACTAACAGATCAAGACCCTAGATAGTTCAACAGTTAAAAAGTTAACATCTTTATGGTCCTGGCAATGTATTTGCAAAAGCAATCTATAAACCTCCTCTATTCAATTTATCTTAATTATCAGAGATCAGAAAGTTGTTTAAGAAAGAAGCCCAACAAGGAAGGAGTAAAAATGCCCCCTCCCCATACAAGGCTATGTACCTTTTACCAATAAATGTTGTTTGTCCTCTGAACCCCTTTCATTCCAGAATTTTCAGAATCCCTCTTAGTGGTGTTATGGCTGTTGCCCACACAATGGTTGCTGCAGCTTCAGCTCCAACGTTCAGGCGAAATGTTACTTTGtaattaatttgatatttagttATATTTAAAGCtcataatattaattaaatattctagacaaaattatgaaaatgaaagtgtaaaaaaaaacactgtttGAATTGCAGCAAAAATTACAGACATCATATAATTAGTTGAGTCAgacattttattgtttgttttaaaataaattgttaatttTACTTGAAAAGTTATCCtaaattttatgcaaaataAATGATCAAAACATGCATTGTCTGATGATTTTAGTAATAATTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P08629	Thioredoxin OS=Gallus gallus OX=9031 GN=TXN PE=3 SV=2
O14463	Thioredoxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=trx1 PE=3 SV=3
Q851R5	Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006386 (this species only)
Ubiquitin family	ULD\|UFD\|UBX · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09409 all species →	PUB	PUB domain	Domain	Interproscan
PF00085 all species →	Thioredoxin	Thioredoxin	Domain	Interproscan
PF00627 all species →	UBA	UBA/TS-N domain	Domain	Interproscan
PF00789 all species →	UBX	UBX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001012 all species →	Domain	UBX domain	Interproscan
IPR018997 all species →	Domain	PUB domain	Interproscan
IPR036339 all species →	Homologous_superfamily	PUB-like domain superfamily	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR015940 all species →	Domain	Ubiquitin-associated domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46115 all species →	THIOREDOXIN-LIKE PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0015035 all species →	Molecular Function	protein-disulfide reductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000006807.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.