Gene detail

Detailed information of ENSDLIP00000007271.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020911836.1, LOW QUALITY PROTEIN: rho GTPase-activating protein 5-like isoform X2 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000007871

ATGTCCAAGAGGAGTAACGAGTTGAAGACATACAACATTTCAGTTGTAGGTTTGTGTGGATTGGACAAAGATCAATCTCTATATGGTGTTGGAAAGTCGTGCTTCTGCAATCGGTTCGTACGGCCGTTGGCTGATGACTTCATAGCTAATCATACTTCGGTGTTTTCTACTTCTGATTTTGGTGGAAGAGTCATTAATAATGACTCGTTTCTTTACTGGGGAAGTAAACTACAAACTAGTGATGAAGGAATTGAGTATAGATTTAATATTATCGAGCAAACTGAGTTCATCGATGATGCCTCTCTTATGCCACTGTCTCGCGGCGGCCTTCCCTACCATAAACGAGCCACCGCTACTAAACTCAACTCACCAGAAAAACTTATGTATATTAGCAGAGAACAAGTAGCTTTGCAGAATGACTTTGAACAAGTTCCTTTCCCTACTGGTAAGGTTAATGTTGATGGTTTCATTGTTGTTTACGATGTGGAAGCCACTAACGCCAAACGTCTAGAGGAGACGCAAGAGCGATTTGTCGCAAGTCTGATATCACAAATACAGAAAACTAAACGACCATTTGTGATTGTAGCTAGTAAATGTGACGATACACAGTTAAGTTTACTGCAAGAATTGTACAGATTTATTCAGAGTAAGAAGATCAATGCACCAATAGTCGAATGCTCGGCTATGGAAATGATCAATGTTGATCTTGCTTTTACCGTTCTCGCGCAGTTGATTGATAAAGGCAAAGTTAGAGCTAAACTTACTCCATATTCCGAAGCGCATAAACTTCACCAAGAATtattggataaaaaaatgcaagatTACCAAGCCTTAATTAATCGTACAGTCAGCGATTTTCAATGTTTATGGAAGAATGTCAAGAAATCAATCGAGGACAAACCCGAGTATGTGTCGTATCGCGACTTGTATGGCTCCGACGCGTGCAAGAAAATATTCTCCAAGCACATTAGGAAATTGCGCCGTGAATttgaagaaagaaagcttatgGAATATATGCTGAAGCTCCCTCATGCCCTAGATGAACTCGTACCGTCTATTAGTGCGGTAGAATTGTATCAATGGAACTGGCATATTTGCCAGACGATGCTCCGAAACCATAAAGATTTTTCAAAGTGGATGATTGTTCTTCCCGATCGTACACCATGGAATGAGAGTGATTACATCTTAACCGATGATTGTCGCATTCCCTATGATGTATTATCCCTTCCACAAGCTGCACAAGCTTTCCAACTTCACATAGAAAAGCTGAAAGCAGCAGAGAAGAAGAATCGCATGAGAAGTGAATTCAGAAAACTTTTGGAACTCACTCCTCAAATTCGCCCTGGTAGTGAATGGAGGGAGATCGACTCAGTCCTTCAAAACGAGGAAAGTTATCAGTATTTAGAGGAATCAGAAAGACTGAGAATTTTTGATTCTTATTTACGAGATATTACTGAAAAAGCTAAGGCGGATTTCCAGGAGTTGTTGTTCGAATCAGCAAGTTGTTTCACCAAAATAGGTCTGAATACTACTCCATCGGAAGATGATATGCAGGCCATCTATGCAAGTCTGTGGCTCGATGACCGTTATAGAAGACTAGATAAACTAGAAGCTATTCGTAAAATACGAATCTTGAATCATATTGCTCTGTTGAATAGTCCATCACGATGTCTTTGTGGGCCAGACAAGTGTAGTGATAGGTTGATGCAAGAGATAGTCGCAACAACAGCGTATCGacCATGTTCTGGAAGTGATGAGACACTGGACAGTGATGACAGTCAGCTTAGTATTGTCATCCTAGGCAGTGAGGGACTGGCACAGAGTCTAGAGACTGAGATACAGTCCCAGTGTTCTTATGGTGAAGGTTTAGAGTATGTTCTTGATGGCCGTATGTATGAGTTAGACTTACGGGTTcttgatggtgatgttgatatacCAGAATATGGACTAACTACCACTGATACCACTCCGCATGGGTATTTCTGTGTGTACTCTACAGCCAGTTCTCTAGAATACCTGCATGACTTACTAGAAGACATGTACAGCAAGTCACGGTATAACAGTGTGGATGATACATCAATGCTTAACCTGTCAGCGTCAATAACTATCTTCCTGGCCAAGAATGCAGACAATGAAGATGTTGAGTCATTATCCAGTCTAAGACACAAAGGACAGGACCTGGCACAGAGATTTAGTGCATCATTTGTGGATATTCCCTTGGCTAGATTTTCTCGTGATAAAGTCATCCATGAGACACAAGTGGTTGACGCCATGAGAATCCTGGTGGAAGATATCAAACAGCAGTCAAGAAAGATGAGCTCTACCGATGACATTAGAGATGCTGAGCCAGATCTCAAGATAATGCTGTGTGCTATGTGTGGTGATCCCTATCCAGTAGAGCTCATCTTTGGTTATTGA

Transcript

ENSDLIT00000007871

GGCATTTCAAACAAGCGAGAAAATGGCGGCTTTGAGGGAGCTCAGTGGTTATAAATCATAGATATGGGCGAGAAATCATAGCGGAGAAGGCTCCAAAGCCGAGTTATGTCCAAGAGGAGTAACGAGTTGAAGACATACAACATTTCAGTTGTAGGTTTGTGTGGATTGGACAAAGATCAATCTCTATATGGTGTTGGAAAGTCGTGCTTCTGCAATCGGTTCGTACGGCCGTTGGCTGATGACTTCATAGCTAATCATACTTCGGTGTTTTCTACTTCTGATTTTGGTGGAAGAGTCATTAATAATGACTCGTTTCTTTACTGGGGAAGTAAACTACAAACTAGTGATGAAGGAATTGAGTATAGATTTAATATTATCGAGCAAACTGAGTTCATCGATGATGCCTCTCTTATGCCACTGTCTCGCGGCGGCCTTCCCTACCATAAACGAGCCACCGCTACTAAACTCAACTCACCAGAAAAACTTATGTATATTAGCAGAGAACAAGTAGCTTTGCAGAATGACTTTGAACAAGTTCCTTTCCCTACTGGTAAGGTTAATGTTGATGGTTTCATTGTTGTTTACGATGTGGAAGCCACTAACGCCAAACGTCTAGAGGAGACGCAAGAGCGATTTGTCGCAAGTCTGATATCACAAATACAGAAAACTAAACGACCATTTGTGATTGTAGCTAGTAAATGTGACGATACACAGTTAAGTTTACTGCAAGAATTGTACAGATTTATTCAGAGTAAGAAGATCAATGCACCAATAGTCGAATGCTCGGCTATGGAAATGATCAATGTTGATCTTGCTTTTACCGTTCTCGCGCAGTTGATTGATAAAGGCAAAGTTAGAGCTAAACTTACTCCATATTCCGAAGCGCATAAACTTCACCAAGAATtattggataaaaaaatgcaagatTACCAAGCCTTAATTAATCGTACAGTCAGCGATTTTCAATGTTTATGGAAGAATGTCAAGAAATCAATCGAGGACAAACCCGAGTATGTGTCGTATCGCGACTTGTATGGCTCCGACGCGTGCAAGAAAATATTCTCCAAGCACATTAGGAAATTGCGCCGTGAATttgaagaaagaaagcttatgGAATATATGCTGAAGCTCCCTCATGCCCTAGATGAACTCGTACCGTCTATTAGTGCGGTAGAATTGTATCAATGGAACTGGCATATTTGCCAGACGATGCTCCGAAACCATAAAGATTTTTCAAAGTGGATGATTGTTCTTCCCGATCGTACACCATGGAATGAGAGTGATTACATCTTAACCGATGATTGTCGCATTCCCTATGATGTATTATCCCTTCCACAAGCTGCACAAGCTTTCCAACTTCACATAGAAAAGCTGAAAGCAGCAGAGAAGAAGAATCGCATGAGAAGTGAATTCAGAAAACTTTTGGAACTCACTCCTCAAATTCGCCCTGGTAGTGAATGGAGGGAGATCGACTCAGTCCTTCAAAACGAGGAAAGTTATCAGTATTTAGAGGAATCAGAAAGACTGAGAATTTTTGATTCTTATTTACGAGATATTACTGAAAAAGCTAAGGCGGATTTCCAGGAGTTGTTGTTCGAATCAGCAAGTTGTTTCACCAAAATAGGTCTGAATACTACTCCATCGGAAGATGATATGCAGGCCATCTATGCAAGTCTGTGGCTCGATGACCGTTATAGAAGACTAGATAAACTAGAAGCTATTCGTAAAATACGAATCTTGAATCATATTGCTCTGTTGAATAGTCCATCACGATGTCTTTGTGGGCCAGACAAGTGTAGTGATAGGTTGATGCAAGAGATAGTCGCAACAACAGCGTATCGacCATGTTCTGGAAGTGATGAGACACTGGACAGTGATGACAGTCAGCTTAGTATTGTCATCCTAGGCAGTGAGGGACTGGCACAGAGTCTAGAGACTGAGATACAGTCCCAGTGTTCTTATGGTGAAGGTTTAGAGTATGTTCTTGATGGCCGTATGTATGAGTTAGACTTACGGGTTcttgatggtgatgttgatatacCAGAATATGGACTAACTACCACTGATACCACTCCGCATGGGTATTTCTGTGTGTACTCTACAGCCAGTTCTCTAGAATACCTGCATGACTTACTAGAAGACATGTACAGCAAGTCACGGTATAACAGTGTGGATGATACATCAATGCTTAACCTGTCAGCGTCAATAACTATCTTCCTGGCCAAGAATGCAGACAATGAAGATGTTGAGTCATTATCCAGTCTAAGACACAAAGGACAGGACCTGGCACAGAGATTTAGTGCATCATTTGTGGATATTCCCTTGGCTAGATTTTCTCGTGATAAAGTCATCCATGAGACACAAGTGGTTGACGCCATGAGAATCCTGGTGGAAGATATCAAACAGCAGTCAAGAAAGATGAGCTCTACCGATGACATTAGAGATGCTGAGCCAGATCTCAAGATAATGCTGTGTGCTATGTGTGGTGATCCCTATCCAGTAGAGCTCATCTTTGGTTATTGATGGTTTGTGTTATGTAGGATAATGCTGTGTGCAATGTGTAGTGATCCCTATCCAGTAGAGCTCATCTTTGGTTATTGATGGTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q13017	Rho GTPase-activating protein 5 OS=Homo sapiens OX=9606 GN=ARHGAP5 PE=1 SV=2
P81128	Rho GTPase-activating protein 35 OS=Rattus norvegicus OX=10116 GN=Arhgap35 PE=1 SV=3
Q9NRY4	Rho GTPase-activating protein 35 OS=Homo sapiens OX=9606 GN=ARHGAP35 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002900 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01846 all species →	FF	FF domain	Family	Interproscan
PF00071 all species →	Ras	Ras family	Domain	Interproscan
PF19518 all species →	RhoGAP_pG1_pG2	p190RhoGAP, pG1 and pG2 domains	Domain	Interproscan
PF16512 all species →	RhoGAP-FF1	p190-A and -B Rho GAPs FF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002713 all species →	Domain	FF domain	Interproscan
IPR036517 all species →	Homologous_superfamily	FF domain superfamily	Interproscan
IPR051978 all species →	Family	Rho GTPase-activating domain-containing protein	Interproscan
IPR039007 all species →	Domain	Rho GTPase-activating protein, pG1 domain	Interproscan
IPR039006 all species →	Domain	Rho GTPase-activating protein, pG2 domain	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR045786 all species →	Domain	Rho GTPase-activating protein, pG1 and pG2 domain	Interproscan
IPR032835 all species →	Domain	Rho GTPase-activating protein, FF domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46005 all species →	RHO GTPASE-ACTIVATING PROTEIN 190	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0007266 all species →	Biological Process	Rho protein signal transduction	Interproscan
GO:0008361 all species →	Biological Process	regulation of cell size	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000007271.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.