Gene detail

Detailed information of ENSDLIP00000007796.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_031552111.1, roundabout homolog 1-like isoform X1 [Actinia tenebrosa]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000008580

GTTAACTCAAAATGTCTGACAAAGGCAACTCTTTCATTGTAAAAGCGTCTTTGGTTGTGTCAGCACTATTTGGTGTATTATGTATTGGAGCACTGATCAGAGTTGAGCTGCTTTTACAAGAACACCAAACACTAATAGACGACATAAACGACAAAACTCATTGCTTGAAATTGTGTCAAAAAAGACAGGAAAAGCGAGATAAAGACTCATATGTGCCACAACACATCGACTCTGTCAGCGTGACCTCAAGACTGCGTCGTCACGCCGTCACATCCAACTCAACAACAATTCACAAGGACCTCATTTCACATTTACTATCTATTGTAAAACTTTGTGACACAAAGTCAAACGTGTGTACAGGCCAACGCGGTCCGCGTGGGAAGCGTGGTAGAAAAGGACTTCCGGGACCTATGGGAAAAACAGGCCCGCAAGGCATTATGGGTCCGCCTGGACCTGTAGGTACACGAGGAGTTCCAGGCCCTCCTGGTCCACCAGGGCGTGACGGAAGGCCTGGTCAATCACTATCTGTACCAACTGTAACTGTGTCTCCTCCTACCTTAGTTGTGAATGAAAGTGAAACAGTTTTGCTACATTGTGATAGCAGAGGTAATCCACGACCATCCGTCAGATGGGAGAAAGAACAGGGAGGACTGGACACGAcaagaatgaaagaacaaccaaacaaacatgGCGTTAGTCTTGAAATACGACATGTAACTATGAACGATAGTGGTGTATATCAGTGCAAAGGGACCAACATACTTGGAGAGGCATTAGACAAAACACGACTTGAAGTTAATTTCTCTCCTAGGATTTTCCTATCACAAGAACCTGTTTACGTCAAATACGGAGAAAACGTCACACTGCCGACATGTCACTCGATTGGACATCCTCTACCAAGGGTCACGTGGTCTAAATCATTCAGTAAACTTCCCGGAAATCGCACAATACATGATGGAAATCGCTTGACATTACTGTCAGTTGTAAAACAAGACTCTGGCTCATACGTTTGTAATGCTGAGAATATTCTGGGATCAAATAAGAAAAGGTTATCAGTTATGGTGGTGATACTACCAAAACTTACCACCATCCCTCCCTTGTTGGTAAACATCGATCCAGGACAAACATTGGCACTATACTGTCAAGCAACAGGCGACCCTTCCCCAGTTATCTCGTGGTCTAAAGATAACCAACGATTACCAACTAATAACAGAACAAGAGTGCAAAATGGCCGACTGACTATTACTAACGTCAATGCTCGTAATTCTGGGAAATACGTCTGCAAGGCCATCAGCGCTGGTGTGTTTGTTGACAAAGTAGCTTCCATGGTAACAGTAGTGAAATCCTATGATATCAAGTTCCCTCGTAAAGCAACAAGTGATTACATAATCGTCAGCAGAAACATTCCCTCGATGACAGTTTTCTCTATTAGTTTCTGGTTAAAGACAACAGTATCTGGAAATGGTGCAGTTATCAGTTATGCCGTACCTAACGGTGCAACCAATGAAATACTCATTGACAGTCCAAGTTCTTTGGAACTATATGTTCTTGACAGCCATTGgAATTCAAAGGTCTCTTTCAATGATGGCCAATGGCATCACATTTGCGCGACTTGGGAAAGTACAACTGGTCAAATATCGATCTGGAAAGATGGCACAAAAGCAGCAACAAATACCTTTGGTAAAAATCGAGGCATTAAATCAGGAGGGACATTCATCATTGGTCAAGATCAAGACAGCGTTGGAGGCACGTTTGAATTACGTCAAAGCTACGTTGGTGAGCTTTCGCAAATAGCAATATATAACAGGGTGTTGACACAACAAGAAATAACGATTCTTTCACGCAATTGCAAAGGTAAAGTACCGGGAGAAGTACTGTCATGGAATGATATTGTTTCCAGTAGCACAGTTAATGGCCAAGTAATGATTGCATCCCCATCTTCCTGTTAATCTTAACTaatcttatatttttatgGGGCCACAAAGATCGTTTTCGAAAATCTTGTTATGATATGAagcagggccgtaaccaggaGGTGAACAGAGTGTGTGTCCATCTCCCCTGAAAAGCAAAGGCCtgctcatccatctccattgAATAGATTTCTTGGatttaaaatgaatgtaaTGAGGTGccaataaggtgtaataatcgccgaaaatataaaaaattgaaagaattgTAATACCGGTTTTCAtaagtttttttgaaaagcacgtcGACGTCAGACTCGTACCCAGTCGTTACTTTCGTGTCGCGGCGCGCAAGGGCTCTTGGGAAGGAGATTTAATAAGTAGCACTTCTGTTCGAGCCTTCCCATGATTCCCTGCGTTCGCTCTATGAGCGATAATAGCGACTGGGTACGAGTCTGCGCAGACTTTATGAAAAATaggacagctactaataaaaaaggctactTAAAACCTATCAATGGTCGTGGGTTTATTTATGTGTACCCCCTTGTAAAAGTTCTGATCACAGCCTGTGAACAACATGCTTTCCTCAATGAAGATTTATCTTACTACTATTACCAATCCAACTCTGGATGTAAGAGGTTCGTGAAGGCCTGGGAGGAATAAAGAGTAGAACCGGCAGAGATATTTGGCACCCGGAGTATACCAATCCTGGACGAACGCAATGCATGCGATAGGTACCATTTtggataaacaaaacaaaaaagcaatagctatattgaaaaaaaactcgaGTATCGCTTATCGACACCTCAAGTACAGCAGCATCGCAGCTCAACGGGGTCGAACTGAAAGcattaaaataataagaaaaaaagaaattaaacaacaacCACAATAACTCAACTCTTCAAAcgattaaaaaatgtttattgtcTGTGCCTTTTAGGGTCGTTACCAGGCCCTTACGAACAATTTATCATAGAGAAAGAGACTGGTAAAGGATGAGAATAAGTCGATTAGATCAGTccttaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D3YXG0	Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q4LDE5	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
Q96RW7	Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000013 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF01391 all species →	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF00354 all species →	Pentaxin	Pentaxin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR051170 all species →	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR001759 all species →	Family	Pentraxin-related	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR008160 all species →	Repeat	Collagen triple helix repeat	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR030476 all species →	Conserved_site	Pentaxin, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231 all species →	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSDLIP00000007796.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000007796.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.