Gene detail

Detailed information of ENSDLIP00000008423.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020907907.1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000009361

GAATCCAATATGGCGGTTCCTCTGACACCGATTGTGAGATGGGCCCAAACGAAAGATCGATTATTTTTAACCATAGAACTTTCCGATGTTCAGTTTCCTTCAATCGATTTGACAGAAGGTCGACTGATTTTCCAAGCCTATGGTCATGGGGCTAGAGGAGAGAACCAATACCAATTGGAAGTGAACTTTATGGAACCAATAGACCCTAAGAGAAGCAGCCACTCTCTGTTAGAGAGGTTTGTGGATTTTAGTATAGCCAAATGTGATGGAAGAGAGTTTTTCTGGCAAAGGCTTGTTGATACAGAGAAAAAGCCACATTGGTTGAAAATCAACTTTGACAGATGGAAAAATGAAGATGAtacagaagaagaaaaagacaaaaatgaaGAGGAAGAGGAAGAACAGGATCCACAAATCAAGaaaatattatttgaacaAAGATTTAAAAGAGATTATGATGCAAATGTGgataaagcaaaacaagaTGACTCTTTGCCAGGTACCTATGATGCTGTTAGTGATGTCTTGGCAACCTGTCAAATAGCTGCCATCATGGAAATCATTCACCCTGCCAGTGGTTTAGTTAGGACCAGTGTTTTAACTCCATTTATGCAGGTTGCAGGCAGAaatatggtgttgtttttaGTATTGGTTCCTAATAATGAGCTACACCAACATCCTGTGGTGTTTTTCCTGTTCCTGGCTTGGTCTTTGATTGAAATTATAAGATATCCATTCTACATAGCTCAGACTCTTAATGTACCGATTGAGCCTCTGATATGGCTGAGATATACGGCTTGGATACCTCTTTACCCAGTTGGGATTATATGTGAAGCAACTCTTATATGGAAAGCTATTCCTCTACTGGAGAAGTCTCAAAAGTTTTCTTACTCTCTACCCAATGCTCTAAactttagttttagtttttcattCTTCCTCAGATTTTATCTACTCTTCATGGGATTTGGGGCATATTACATGCTGTCATACATGCATTTCCTTAGAAAAAGACGATATGGACGGAAAAAGAAAACGGCATAATCATTGATTGTCAGTGATAGTCTGGCTTGCACCCTTGTTAGAGTGCAATAGTACTATACCTGAGAAAAAGTTAACCAACTAGACAGTGCATATATTTGTTAACTATGGAAATCAGCTGAGTTTTTAAAGAATTCCATGGAGAGCAACATCATATTGGTTATCGGTTGTTTATCATGATTAAGTTGTGATTGAAGTTTAGATGgaatagttttgttttttaacaaataCAGTCTTttgcatttcattgttttacatttgtGTATTATGCTGCTATTCATAACAACATGTTCAAGCTTTGATAGTTTGCTGCATTCCTGTTTAGTGCTAATATTTGTTAGCAGATATTTCATAGGTATCAATATTATTGGCAATCAAAATCCATCTTGTGCGCAAGGGAGCCCAGGTCACAAGAACATCACAGATTTATTCTACTGATTTAATAACACTAGGGAAatcaatttacaaaaattattatataagcaattcaaagaaaacaactacagtttttaaaatcataatTCGGCATATTTgaactattattatttatagttatGACCAATTATATTAGTTGTGATGTAACAAAAGTAACGATATGATGGAAAATTGAAAGTGATAACAAAGTAAGCAAGGTTTTGAGATTTTGAACTTGCCTGTTGTAAGTTCAGGATTGTTACTTTTGACATAAAATGCTGTAGTTGTTTTCTATAAATTTGTTACATTTCAGCTAACTTTCAAGATCATTTGGAAATTATTATATGTAGTTCTAAGTATTCCAGACTACAAATAGTTATATCATAACTAActtcagaaaatacaaattgaaacTGAAGACACAGCATATTTTATAACTTTAGATACTTGCATTTAGGAAGAGGGGGGGATTCTATTGGCTCTCTGTGAGAACATAGCAGTCTCTTTAGGTTGTGATTCCTTTTGAGAAATAACTTCCTCTAACGACTTGCTAGAGACCTTCTTTTCATGTTGGGATATAACAAAATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7SY06	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Danio rerio OX=7955 GN=hacd3 PE=2 SV=2
Q5ZM57	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Gallus gallus OX=9031 GN=HACD3 PE=2 SV=1
Q8K2C9	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 OS=Mus musculus OX=10090 GN=Hacd3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004335 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04387 all species →	PTPLA	Protein tyrosine phosphatase-like protein, PTPLA	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007482 all species →	Family	Protein-tyrosine phosphatase-like, PTPLA	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR007052 all species →	Domain	CS domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11035 all species →	VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0018812 all species →	Molecular Function	3-hydroxyacyl-CoA dehydratase activity	Interproscan
GO:0030148 all species →	Biological Process	sphingolipid biosynthetic process	Interproscan
GO:0030176 all species →	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0030497 all species →	Biological Process	fatty acid elongation	Interproscan
GO:0042761 all species →	Biological Process	very long-chain fatty acid biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000008423.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.