Gene detail

Detailed information of ENSDLIP00000008464.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: KXJ12690.1, Cellular tumor antigen p53 [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000009407

GAACAAGCTCCACTGGTGTGTCCGAACTGGTTGGTTGTCATTGTGTCATGTCCCAAGAGTCTACTGGTAGTGACAGTTCTGATATATCTAACATCATGTCAGAAGGCACTTATCAAGagttacattacattactggAGATATACCAGTATGCTCAGGTTCATTCTGTCCCATCAACATCTGGAACAAGTCAAATCATGACAGATATGATGCCATTTGTGTCTGATTATTCCAGTAATAGTTATGATTATAGCCAGCAGTCCTCTTATCGTCAGCCACAAGCAATTGCACCAACGCCATACATTAATACAAGTAGAAACAATGCCAATATTCCTGTCAATGTTGAACCAGAATGGCTGCTAACTAAAGACGATTATGCTGGGCCTTATAAATTTGGGATAGggtttgaaaaagaaaagaccCCAGTTGTCAAAGGAGTGCCTTGGACATACTCTGCACAATTGAACAAGatttttgctaaaaataaAGTGGATATCCCTATCAGGTTCTTTCTCAGAGCTCCTCCCCAAAGAGAAGTTTATACAGGCCTCTACTTGAAAGTCGTTCTAGTATTCTCACAGAGTGAAAATCATGGGATGATAGTACAGAGATGCCCAAACCACGAGTCTGCAGATCAAATAAAGCACATAATGGAATCTAGTCATAATGAAGCCACTTATGGAACAACCAACCACGGCCATCATATAGTGGTGATTCCACTGAGAATCCCCCATGTTGGCCAAGAGTATGTCCTGGAGTATTTCAGGTTTCTGTGTCTCAATACTTGTGTAGGAGGACCGCATAGGAAACCCTATCACTGTATTTTTCTATTGGAGCATCATGGTAAGATAGTTGGGAAGAGAATTCTTCATATCAAAATCTGCTCCACACCTGGCAGAGATCGaccaaaagaagaaaaaggcCCATTGACAACAAGACGACATCAACACATTCCGAAAGTCAAACAAGAGCCTACAGAGTCACACACTACAGTTCATCCTCAGATACCACCAAAGACCGCTACAACCACAGTTAAGGAAGAAcaagatgatgaagatgacaatGAGTTGTATGTTATACAGGTCCGTGGCAGGAAAAAGTACCAAGCTCTGTTACAACAGAAGGAATTGTTAGATATAGTAGATCTTGTACCACAAGAAATATTAGCTGGTTATCGTGCAAGTTGTCCACCATGTGGTCCTGACTGGTTCCTTCGTCAAAACAGAAGAACTGTACAGGCAAGCTCAACTAACACCAGTGCTAGTGATGCACCATCAACACAGCCAGACAATGATCTAACTACTTCAAGCAGATTCTCTCTCACAAGGCATAAAAGACCTGTACAGAAGACAGCTGAGAAGACCTCTACTACAGCTGGAACATGCACAGCTGTAGTTAATTAAGAACATTAATAGCTGTATAGATTCAAATCTATGCCCTCATTAACTAGAACTGTCAGCAGTtagtttgcaaattctctttatATTCAAGTTCTTAATCCCTTGGGAGATTAATAGAGATTATTACAATACTACTAAGTGCACTATAATATTGAAGTGTGCAAAGCAgtagttattttaatattgtcATGCAAATAGTTCTTAAACACAGGGACATGACCTGTTATTCCGAAACTGTTCAAAGCTAATACCTTTTAACTAATGAATATGAATTATTAGTGGCTTTTGAAGACTAGTCAAAGTGCAGTTAAATTTATTAATGTGACGTAAATAATTATGATAGCTAGTCTTACATACCTTGCTATGTATTAATTGTATGAAAGGATACAAGCCCATTCAGAAAACACAAGCTAGCTTGTGATATGTAACTTCAAGGCTGTTAGAGAACACTGAGAATGAAGTGTTGATTCAGCATccatgaagaaaaaaaaaatatatatatatatattagaatgcatgcactaaaagtgtgcaacataaataccactaaatagtgctattttatgctaatcatattttcttttgttcaattaagtgctatttactactaaatagtgacaactgttgcacacatttacaacaacaaagaaagaaaaaaacaccaggaatatattgtttataaaaacaataattttaaaactgccctggaaaaaaaaaatctcaggACATTGCTTTTGTGATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9W679	Cellular tumor antigen p53 OS=Tetraodon miurus OX=94908 GN=tp53 PE=2 SV=1
P10360	Cellular tumor antigen p53 OS=Gallus gallus OX=9031 GN=TP53 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000826 (this species only)
Transcription factor family	P53 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00870 all species →	P53	P53 DNA-binding domain	Domain	Interproscan
PF07710 all species →	P53_tetramer	P53 tetramerisation motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012346 all species →	Homologous_superfamily	p53/RUNT-type transcription factor, DNA-binding domain superfamily	Interproscan
IPR036674 all species →	Homologous_superfamily	p53-like tetramerisation domain superfamily	Interproscan
IPR011615 all species →	Domain	p53, DNA-binding domain	Interproscan
IPR002117 all species →	Family	p53 tumour suppressor family	Interproscan
IPR008967 all species →	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR010991 all species →	Domain	p53, tetramerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11447 all species →	CELLULAR TUMOR ANTIGEN P53	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0051262 all species →	Biological Process	protein tetramerization	Interproscan
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006915 all species →	Biological Process	apoptotic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000008464.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.