Gene detail

Detailed information of ENSDLIP00000008576.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: KXJ21321.1, Hermansky-Pudlak syndrome 3 protein-like [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000009524

GGCTTGTTCCTGTCTGAAACTAACTTCAACCCAACAAACTCCAAACTCCAAAGAGGTCATAGATGATAAATGTATCTTCTGGTCATTTGACACTGGATCTGGTTGCAGCAAAGAATCTCAAACATGGATCCCTAATGAACATTACTTCAAAACAGTTAGATCTGAGTCGACATACACCGACACCTTCTTAGATTCAAAGGAAGTCATTGGACCCATTGTTGACGTCAAGGGTCACCCTCTAAAAGCTGTACTGGCTGGACGATTTGGTGTTGGGATTAGTATTCCAAAAGATAGTTTCCAAGTCAGAGCAGTGACTATGCTGTATCGTAGATTTAGAGCAGAGAGTCTTTGTAACAGTGATATGGACAGTGTTGCTCTTCACTCTTTGCAGCTTTTACCAACTTATGTGAAAGatGTAGAGACTCCTCACAATACCTACCCTGCCCCACTGCTGCCATCCTATGACCCCACCCTATCCCTCTGCGGCATGTGTACCCTGGTGTCAGGACCTAAAGAAGGTTACATCTACGACGTCTACAAACACCCAAGGTTATTATCGGTGTATAAATACACCCGTGACACGGTGAAAGTGTCTGCATGTCATATGCTACTGCACGCAATCACTAAGGAAGGGCTGGAGACATACACTGTCAGAGTGTTTCCTGCAGCGTCTGAGAGCATCAGAGATGAGACTGCACAGAGACTACTCAATAGACAAACAGAAATCACATCAAAGCAGGACTCGgaagaaaatgtaaacagtTTGGCAGGTAGTGAATTaacagaaaatacaaaaagtacCTCGGCTGATGTCTTGTTAGAAAAAGTTAAAAGCTTCTCCATGTGTGAAGAAAAGGGGCAAAGTAGCTTTGATGAAAAGAGTTCTGTATCATCACAGGAAGGAAGTTTTCATGAGGAAAGGACCTCTTTTTCTGAGAGTTTAGAGAAAGCAGATGCTATCAGGGGCGAGGTAGTAGCAGAGAATATTTCCTTGGTCACAGGGTTTGGTCCTCTTGACCATGATCTTATGGATGAGCCGGGAGAGTATCTTGGTGATAGCCATGAAGCTGTTAAGGTCCCATTGAAATCTATCACTCAAGTTGCACCAGCTGGTGTTATACAGACAACAAAGCCTAATTTACCAGTTCATGATCTAGACTGTCTGAATAAGATATGTCCAAACTCCACTCTTGATATTTGTCTTATTGGCATGTACCCCTTTGCTGGCCCATCTTATGTCATGTGTTCTGACGATAGTGTAATTCTCTTTACAAGAGCTGCACGTGACTCCAAACAAAGAAGAAGCAAGGAACAGAGTGGAGCAGCAAGTAGTCCTAAACCAGAATGGTCTATCTATCAACTGCAGAATATGGACCCTGTTCAGTTATACAAAGCTGTGATGCCTCTTGCAAACCGATGTCAAAAGGACAACCCTCAAGCATTCCATCGTCTGGTCTGTGAACAGCATATGTTTCTAAGATCTTGTTGTCTTTATTATAACGAGaacgagaaagaaaaaagaaagataaagaAATTACTGTGTGAATCATCGGCCAATCTTGGAGATTTGTATGCAAGAGCTGAAGGCGATGAGCGTGCATACTGTGCAGAATATTACGACATGTCTGGGCTTCCTTTACGTGATGTAGTCAGTAGGGCCTGGAAACTAGCTGGGGAGGGTCTGGCGTACTATTTGGATCAAAAGCTTCTGCAATCAGATGAGCCAGTCATTGTAACTGAGGGAATTGCTAAGAAAATCTTCAAGATCTATTCACGTGTTAACCCTAGTCGAGTGTCTGAAGTCATCTTGATGTCATCTCTTACTGGATTCTCTCCGGaaactTCTATCGCTGCGTTggaagatttgaaaaaaactgaaaccaAAGAGAAGACACCGTACAGCACGTATCAAAGAAACTTTAATCGAAATTGCTGACAAAATGGGAGGCTGTATCTCCGGTttgaagcaaaacaaagtCGCGCCACTTATGCCAAAAGAAGCCTGGATGCCACAACCAGAGCTAGATCTTCC

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003955 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14763 all species →	HPS3_C	Hermansky-Pudlak syndrome 3 protein, C-terminal region	Repeat	Interproscan
PF14761 all species →	HPS3_N	Hermansky-Pudlak syndrome 3 protein, N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017216 all species →	Family	Hermansky-Pudlak syndrome 3 protein	Interproscan
IPR029438 all species →	Domain	BLOC-2 complex member HPS3, C-terminal domain	Interproscan
IPR029437 all species →	Domain	BLOC-2 complex member HPS3, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28633 all species →	HERMANSKY-PUDLAK SYNDROME 3 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006996 all species →	Biological Process	organelle organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000008576.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.