Gene detail

Detailed information of ENSDLIP00000010458.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020910746.1, uncharacterized protein LOC110248550 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000011637

CATTTATcgatttgttttctttatctttctgtttttcctcttttttctgtatttgatCAACTTGACGGGGTTCCTGTGTTGGTTTAACCGAGTTGTGTTGCCGAAATCTGATCTCGAATAATAGCAACAAGAGTCGAGAGTCGTTACAAGATGGATACGAAAAAACTGGCTGAAAAATGCGTCGAAGCAAGCAAACGAATTCGTCCTACAGTAAGACACACACCTACTGAATATTCCTACTGGCTCAGTTCACTGCAAAAAGACAGCAAAGTCTATATCAAGTGGGAAAGTGAGCAGATATCAGGTTCAGCCAAGGCTAGGGGAGCATTTAACAAGTTAATGGTTTTGAAACAAGAACATCCTGATCTTAATGAGGCAATTGCCGCATCAACAGGAAACCATGGTGCAGCTTGCTCCCTAGCAATGAATCTCCTGGGAATAACTGCTGGTAGAGTGTATGTACCAACAATGGCTGAACAGTTTAAATGTGACATGATACAGCAATATGGCTCGATTTTAGAGAAGCATGGTGATGGATGTGCCGAGGCAGAGTCTTTAGCAAGAGCTTATAGTGAGGAGAAAGGCATTCCATATATCTCACCATCTAATGATTGGGATGTCCTGGCAGGACAAGGCACAATAGGTTGTGAAATATTTGAAGACCTTCCAACAGTAGATGCAGTGTTTATTTCTGTTGGTGGAGGAGGAATTATTGCTGGTGTTGCTGCTTACCTAAAGACAGTCAAACCAGATATCAAGTTAGTAGGTTGTGAGACTGATCAGTCACCAGCCATGTCAGAGTCCCTCAAAGTAGGGCACATAGTAGAAGTCCCCAATAAACCAACCCTATCTGATGGAACTGCTGGAGGTGTAGAAAAAGGAAACATAACGTTTGAGTTATGCCAAAAGCTGGTAGATGAGTGGGTAATTGTTAGCGAAGACGAAATTGCTAAAGCTATATATGATACCATGGAACAGCATCACAAGATTGTAGAAGGATCAGCTGGCCTCTCTATAGCAGCATACATCAAAACAAAGGAGAAATACAAGGAAAAGACTGTAGTTGTCTTATCATGTGGCAGCAATATTAGCATTACTAgaatcaaaaatatcattaacaCCTATGGTTGATCATTAATAACACGAAATCCTTGAATGTCAAATGGAAATGGATGTTTAAGGAATCAGATTAACATATTAATTTGAACAGAGTTTCAATTCCAAAGAAAGGAACAAGACATAATCAGAATTATAATTAGTAAtgttttttagaatttttagaaagtgaatgaaatgaatgagttgaagattattaaattcaattgaaaacttttccacttttatttttttaaatttttcttgGTTTTACACAGATATTCTTGCTCCAAGCaacatttttcttgtattgCATCACAATGACGATGTACAGAGATTATCAAAATTGATGTGTTAAGTTCCAGAAAATATCCATGACCATAAATTTTTTGCAGAAACCCAGCAAATCTCTGGAGATTCTGAAAGAAATTGGTATATACCGGTAATGGATATTTTGTGGAACTACACAGTGATGACCACATCCACATGGTTATCACTGAAACATGAAATAATGTTTACTAAATAGTATTCATCAatcaacatatttattaataccaaacatttttttagaaatacaagAAGCTGTTACTCAATGCCATTTGGTTATGCCAAATTATTGCATGAAaagtttgtttctgttgcatATTGCAGGATATCTGTAGCACAATGCACAATTCAATGGTTTGTACAATTGCTTTGCAAAGTTTAAAGTTGAATACAAATTGCATTGAATAACAGCTCCTTGCAATAACTATTTCATGGTTCAAGGACAGCCACTGCATCACACTTTCTCTGCAGATCTCAACCGATATGTTTCAAGGTCTCCACTAGTTTGAAATTCTATGACAACGAATTTGTAAATGCATTGGTAGATCTTACACTATAAATATTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9WYJ1	L-threonine ammonia-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0356 PE=1 SV=1
Q2FH01	L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain USA300) OX=367830 GN=tdcB PE=3 SV=1
Q2FYJ3	L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=tdcB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003446 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291 all species →	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001926 all species →	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan
IPR036052 all species →	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR050147 all species →	Family	Serine/Threonine Dehydratase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48078 all species →	THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003941 all species →	Molecular Function	L-serine ammonia-lyase activity	Interproscan
GO:0004794 all species →	Molecular Function	threonine deaminase activity	Interproscan
GO:0006565 all species →	Biological Process	L-serine catabolic process	Interproscan
GO:0006567 all species →	Biological Process	threonine catabolic process	Interproscan
GO:0009097 all species →	Biological Process	isoleucine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000010458.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.