Gene detail

Detailed information of ENSDLIP00000010458.1 in Diadumene lineata

Genomic Location: :...
NR annotation: XP_020910746.1, uncharacterized protein LOC110248550 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDLIT00000011637

CATTTATcgatttgttttctttatctttctgtttttcctcttttttctgtatttgatCAACTTGACGGGGTTCCTGTGTTGGTTTAACCGAGTTGTGTTGCCGAAATCTGATCTCGAATAATAGCAACAAGAGTCGAGAGTCGTTACAAGATGGATACGAAAAAACTGGCTGAAAAATGCGTCGAAGCAAGCAAACGAATTCGTCCTACAGTAAGACACACACCTACTGAATATTCCTACTGGCTCAGTTCACTGCAAAAAGACAGCAAAGTCTATATCAAGTGGGAAAGTGAGCAGATATCAGGTTCAGCCAAGGCTAGGGGAGCATTTAACAAGTTAATGGTTTTGAAACAAGAACATCCTGATCTTAATGAGGCAATTGCCGCATCAACAGGAAACCATGGTGCAGCTTGCTCCCTAGCAATGAATCTCCTGGGAATAACTGCTGGTAGAGTGTATGTACCAACAATGGCTGAACAGTTTAAATGTGACATGATACAGCAATATGGCTCGATTTTAGAGAAGCATGGTGATGGATGTGCCGAGGCAGAGTCTTTAGCAAGAGCTTATAGTGAGGAGAAAGGCATTCCATATATCTCACCATCTAATGATTGGGATGTCCTGGCAGGACAAGGCACAATAGGTTGTGAAATATTTGAAGACCTTCCAACAGTAGATGCAGTGTTTATTTCTGTTGGTGGAGGAGGAATTATTGCTGGTGTTGCTGCTTACCTAAAGACAGTCAAACCAGATATCAAGTTAGTAGGTTGTGAGACTGATCAGTCACCAGCCATGTCAGAGTCCCTCAAAGTAGGGCACATAGTAGAAGTCCCCAATAAACCAACCCTATCTGATGGAACTGCTGGAGGTGTAGAAAAAGGAAACATAACGTTTGAGTTATGCCAAAAGCTGGTAGATGAGTGGGTAATTGTTAGCGAAGACGAAATTGCTAAAGCTATATATGATACCATGGAACAGCATCACAAGATTGTAGAAGGATCAGCTGGCCTCTCTATAGCAGCATACATCAAAACAAAGGAGAAATACAAGGAAAAGACTGTAGTTGTCTTATCATGTGGCAGCAATATTAGCATTACTAgaatcaaaaatatcattaacaCCTATGGTTGATCATTAATAACACGAAATCCTTGAATGTCAAATGGAAATGGATGTTTAAGGAATCAGATTAACATATTAATTTGAACAGAGTTTCAATTCCAAAGAAAGGAACAAGACATAATCAGAATTATAATTAGTAAtgttttttagaatttttagaaagtgaatgaaatgaatgagttgaagattattaaattcaattgaaaacttttccacttttatttttttaaatttttcttgGTTTTACACAGATATTCTTGCTCCAAGCaacatttttcttgtattgCATCACAATGACGATGTACAGAGATTATCAAAATTGATGTGTTAAGTTCCAGAAAATATCCATGACCATAAATTTTTTGCAGAAACCCAGCAAATCTCTGGAGATTCTGAAAGAAATTGGTATATACCGGTAATGGATATTTTGTGGAACTACACAGTGATGACCACATCCACATGGTTATCACTGAAACATGAAATAATGTTTACTAAATAGTATTCATCAatcaacatatttattaataccaaacatttttttagaaatacaagAAGCTGTTACTCAATGCCATTTGGTTATGCCAAATTATTGCATGAAaagtttgtttctgttgcatATTGCAGGATATCTGTAGCACAATGCACAATTCAATGGTTTGTACAATTGCTTTGCAAAGTTTAAAGTTGAATACAAATTGCATTGAATAACAGCTCCTTGCAATAACTATTTCATGGTTCAAGGACAGCCACTGCATCACACTTTCTCTGCAGATCTCAACCGATATGTTTCAAGGTCTCCACTAGTTTGAAATTCTATGACAACGAATTTGTAAATGCATTGGTAGATCTTACACTATAAATATTA

Protein

Uniprot

Uniprot term	Description
Q9WYJ1	L-threonine ammonia-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0356 PE=1 SV=1
Q2FH01	L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain USA300) OX=367830 GN=tdcB PE=3 SV=1
Q2FYJ3	L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=tdcB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001926	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan
IPR036052	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR050147	Family	Serine/Threonine Dehydratase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48078	THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003941	Molecular Function	L-serine ammonia-lyase activity	Interproscan
GO:0004794	Molecular Function	threonine deaminase activity	Interproscan
GO:0006565	Biological Process	L-serine catabolic process	Interproscan
GO:0006567	Biological Process	threonine catabolic process	Interproscan
GO:0009097	Biological Process	isoleucine biosynthetic process	Interproscan