Gene detail

Detailed information of ENSDLIP00000010879.1 in Diadumene lineata

Genomic Location: :...
NR annotation: XP_020900958.1, E3 ubiquitin-protein ligase MARCH2 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDLIT00000012059

ATAGTCCCCTGGCTCAGAGACAACAAAAAGATATCAAGAACACTATCCTTATCAATCTCACATTGTCAAGTATGCAGTCCTGAGCTATTTTGAATGGAATTACACAGAACATCTATTTAAAGAATCTTAACCTAAAACCGTAATCTGCTTGAATCAAGGACATCGTTCGATCGTTGCTAGTATTTAACTCTGCAGTTTTGTCTACGAAATATCCAAGAGGCTTTAATGATAGTTGACATCGTTTTGGTTTGGCTCGGTCGTCATTTCACAGTACCAGCTGTGAAGAAACACTTAATCTAATGTCAGAGGTAAACCTTGAAATCTCCGACAgcaatcaccatcataatgACCACGAAATACACCAAGAAACATCGCTAAACCAACCACAACTTCAACAAAACACGGTGCCAAACTCGTCTCGAGAACTCACTGAAAATGCGTTGGATTCTTACAAAGTTAATTCAACTGCTAATGATACGATTGGAAGCGACAGTAAGGATGTGCCTAACTGCGGCTGTGCCAACTTTGCTGACTGTAGCGCGACATCAGAAATTCATCCTAAAGTTAGAACTTTGAGTTTTACTTCCAACAGGGACACAGAAAATGCACATCCAAACGCCATTAAAGTAACTGTTTCTTCGTCTTCAAACCGCAAAGCCGAAGACGTGGACTTGCGTACTGCTGCATCTAGCACGGACAGTTTGAGCTCTGCTAAAGATGTTCTAACTAGCGGGGACGATTCGCAAACCAGTGAAAACTCGGAAAGTCTTTCAGTTGATTTACCGAACTGGGAGCGAACGCAAAGCGAGCAAGACTATGAAAGTATTCCTACATGTCGTATATGCCATTGTGATAGTGAAGGAGAAGCTTTGATTAGTCCATGTCTTTGTACTGGAACTGTCAAACACGTTCATCATTCGTGCTTGATGGATTGGCTGAAACGTTGTGTGAAGACGAAGTGTGAGTTGTGTTTGCAACCGATTTCGGTGGATCGCAAGACAAAGCCTTTAAAACAGTGGCGTCGACCAGGACAAAAACCAACACCGATAATATGGCTTCTTACTTTCGTTGTCGCTCTTACTCTAAACATCGCATCAATAGCTAAAGACGGTAGTCAAAAATGCGTCTCGAACCCATGCATCATTTTCTACGTTGTTGGAGCGATTGGAGCTCTTCTTGGCTTTGCTTTCTTctatcattttcttctcgttaGCATTCGCTATGTAAAACAATGGATGGCTTTGAACGAGGACTGGACACTAGCCGGTCTGAACAAATCGAGCGAACTGGGTAATGCTAATTTAGGTTTGTCAGATAAGTCATTGGGTGTAAAGGAACAGCGGGATCTGCAAATGGTCGAGATTGTATGATACAGTGAAAGTGCGTGTTTTATGAATTGATTGGGACACACGTGGACCTAGTCTTGTCGGTTTTGGTACGTTTCCCAGTAATCCTTTTCGGTATCACATAGGTCAGTAAAAATTCTGAAAGTCGTGGTGTTGCATCACGTCATGTGCGTAAAGGCTTTTAAAAGATAAAGACAAAAGACACACATAACCTGAGTTTTTCCCAACAAGCGAACAAACTGCATGTTCTTGTGGAGATTACCAGATCGTTGGTTAGTTAAAGTTGAAATCGAAACATTTCGTATTTCATTCTAGGTTTATTTCTTTACAtacaaaaactatttacatctactttttatttatatataatctTATAAAGCAGCTATATACCAGTAGTTTTATATACATACGTTAAGAGTTTTTGCAAAGTGTTTTGTTTGGCGTGATCACAAGTGCTTGATTTGCGCATTATAGTTGTTTAAAGTGTTTATCACCGATATTGACATCATACTGCTTGTTTTTGTCCTCGGCCTAGGTCTCGCTGGCCATACCTTCCACACAGCTAGCTAAAAGATGTTTTCGTCCCAAGGGAAAGATCTCTGCTGTATAGACTAGCTGTGCGCATAATCGGCCATAGCTTGTTGGTAAATTTAGCTCTGGCACGCTTAAGTcgattgcttttttttaatttttaaagatGTTATTAGAGTAGTTGACCTTTTTGTAGCTATCAAAGCTCGGCTGTATCCCATAATGACAGATTTGACTTAACAAAGACACACGTACAGCAGAAAAAGAGCCTTAGATTCGCTTTCGGCTACGACAAGATTACTTTCTTCGACTGAAAATACTCTTActggagtgcaaacactaaatgtgtgcaacagttgtcactatttagtagtaaatagcactaataaaaaaaaaagaaaacaatagaataagcataaaatagcactatttagtggtagttATGCTACAAACTcttagtgcgtgtactctatATCCATTTATCAAAACGCg

Protein

Uniprot

Uniprot term	Description
Q9P0N8	E3 ubiquitin-protein ligase MARCHF2 OS=Homo sapiens OX=9606 GN=MARCHF2 PE=1 SV=1
Q99M02	E3 ubiquitin-protein ligase MARCHF2 OS=Mus musculus OX=10090 GN=Marchf2 PE=1 SV=1
Q5I0I2	E3 ubiquitin-protein ligase MARCHF2 OS=Rattus norvegicus OX=10116 GN=Marchf2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12906	RINGv	RING-variant domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011016	Domain	Zinc finger, RING-CH-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46065	E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10656	MARCH1_8; E3 ubiquitin-protein ligase MARCH1/8	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala