Gene detail

Detailed information of ENSDLIP00000010917.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: KAJ8022468.1, Deleted in malignant brain tumors 1 protein [Holothuria leucospilota]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000012097

ATGAAGTTTAAAGTGCCAGCGTTGGTTTTGTTCCTTGTTGTTTTGTTCCACAAAGTCAACACGGACGAGCTTGCCAGTCCAGATGAGTCCTACGAAGATAAGTCGATCGCGAAGTATTGGGATGAGGACAACAAACATGATTCAGACAACGATGACAACGATGCACTCGGCCCTTTAGACGACCATCAATTAAGATCTTTAAGCTGTGACTTTGAAAACGACACATGTGCTTGGGTCAATGATGCATTAGGTGACTTCTTTTGGACGCGAAATAGAGGAAGTACACCTTCTTCTGGCACAGGACCCAGTGGTGACCACACTACAGGTCGAGGATGGTACATGTACATTGAGACATCTTCCCCCCGTCGGACTGGTGATGTTGCTCGTCTCATTAGTTCAAGCTACTTAACCGCTTCAAGTTTCCGCCAACTGTGTTTAAGTTTCTGGTACCACATGTTTGGTGGGTCAATTGGCAACTTGGCTGTATTAACTGTGGACAGTGGAAACACGTCAAAAACTATATTTAGTCTAAGCGGGAATCAGGGAAATTTATGGCGTCAAGCTAGAGTAAACATTCCTTTTGTGTCAAGGTCATTCAAGCTTGTATTTCAGGGGAGAAGAGGCAGTAGTTTTGACGGAGATATAGCGATCGATGATGTATCTTTAACATCCGGCACATGCCAAAATCAAGTGACAACTGTAACACCAACTCCTACGACTGCGACAACTGTATCGCCAACTCCTACGACTGCGAAATCTTGTACATCCTGCTTCGAAACCTGTTCGGAATGCAAAGCAAgtcattgtttttgcttgaATGGAGCATCTGGATCCTGTCATGGTGGGAAACTTGGTTGCATTTGTTACAATGGCTTTTTTGGAGATCGTTGTCAATTTCcgccaagaaataataatactgGAATTAAACTTGCGACTTGTACCTGCTTAAATGGGGGATCTCCTATTTGCTTCAGACAATCCCTTTTAGTCCGTTGCCGCTGTTTTAATGGATTCTATGGAGATCTTTGCCAATTTAGTCCTATTACAACTCCAAGCCCAACAATGGATGTTCGTTTAGTTGGAGGCAACGTTCCATATTTCGGTCGTTTGGAAGTTTTTCACAATGGTACATGGGGGACAGTATGTGACGATTCGTGGGATAGGACAGACGGCCTAGTGGTATGTCGCATGTTGGGTTTTCCATCTCTAGTGTCCACAGGCACTGCGCCTATTTCATTGCGTGGTACTGGAAGAATTTGGATGGATGAAGTTAGGTGCAGGGGTTCAGAACGATCGTTAAAGGATTGTCCATTTAATGGTTGGGGAAATCACAACTGTCGCCACACTGAGGATGTTGTCGTGCGCTGCAGTTCCGGGACAACTACAACAGCCAATCCTATTACAACTGGATTGCCTTGCTTTTGCTTTAATGGTGGCTCTCCACAGTGCTTCAGAGGGAGGTTAATACGCTGTAACTGTTTTAATGGCTATTTTGGAAATCGCTGTCAATTCCgtcCTACTACAACTCCAAGCCCTATAACAACTTCACAGCCTCAGATTAGATGCTTTCAATGTAGTGGTTTCCCGGGACAATGCAGACAAACTATTGTAACTTGCCCGCGATCATCTTCTGCATGTTTTTCTGCACGATATACTCTTCGAAGCAACGGCCGTGAAGTTGAAAGTTTCGGTTGTGCTACAAGATCTCAATGTCTCAATCTGTGTGCTAATGCAAAGAGGCAAGGATTGGTAACGAGATGTTCCATGAGCTGTTGTCTCAATAATTTCTGCAATAGGAGAGTTTCGACACCCACGCGAAGGCCAACTACAACACGATCAACAAGACCAAACCAACGACCAACAAcATTTCAAGTAAATACAAGATTCTTTGTGAAACAAGTTTTGAAACTCCTGAAAAGCTACAAGAACATGCTTGATGTGTTTGAGTCATTGCTGAAAGCGTATCTTAAGAGTGATGATGCTCGAGCCGCTAAAAGGGAAGTGGTGTCTATGATGAAAAGGGTCGACGACGCGTCCAGTCAGCTTGGAGAGTCCAACGAACCCGAAGTTCTTCACGCCAAAAGGGATGTTGAAGAGACACGCATACGTGCACAGAAACTCGTCAAGAAACTGGATTCATTCACTGataaCGACCCTTCAAAAGACGTAGAACTTTAG

Transcript

ENSDLIT00000012097

CATAGATTTGCACGAATATTTCACATATGTTCTCTCAGAAGACTCCATTAGCTGAATTGGACTCAGTCTGTTAACATCTTGTTCAGAAATGAAGTTTAAAGTGCCAGCGTTGGTTTTGTTCCTTGTTGTTTTGTTCCACAAAGTCAACACGGACGAGCTTGCCAGTCCAGATGAGTCCTACGAAGATAAGTCGATCGCGAAGTATTGGGATGAGGACAACAAACATGATTCAGACAACGATGACAACGATGCACTCGGCCCTTTAGACGACCATCAATTAAGATCTTTAAGCTGTGACTTTGAAAACGACACATGTGCTTGGGTCAATGATGCATTAGGTGACTTCTTTTGGACGCGAAATAGAGGAAGTACACCTTCTTCTGGCACAGGACCCAGTGGTGACCACACTACAGGTCGAGGATGGTACATGTACATTGAGACATCTTCCCCCCGTCGGACTGGTGATGTTGCTCGTCTCATTAGTTCAAGCTACTTAACCGCTTCAAGTTTCCGCCAACTGTGTTTAAGTTTCTGGTACCACATGTTTGGTGGGTCAATTGGCAACTTGGCTGTATTAACTGTGGACAGTGGAAACACGTCAAAAACTATATTTAGTCTAAGCGGGAATCAGGGAAATTTATGGCGTCAAGCTAGAGTAAACATTCCTTTTGTGTCAAGGTCATTCAAGCTTGTATTTCAGGGGAGAAGAGGCAGTAGTTTTGACGGAGATATAGCGATCGATGATGTATCTTTAACATCCGGCACATGCCAAAATCAAGTGACAACTGTAACACCAACTCCTACGACTGCGACAACTGTATCGCCAACTCCTACGACTGCGAAATCTTGTACATCCTGCTTCGAAACCTGTTCGGAATGCAAAGCAAgtcattgtttttgcttgaATGGAGCATCTGGATCCTGTCATGGTGGGAAACTTGGTTGCATTTGTTACAATGGCTTTTTTGGAGATCGTTGTCAATTTCcgccaagaaataataatactgGAATTAAACTTGCGACTTGTACCTGCTTAAATGGGGGATCTCCTATTTGCTTCAGACAATCCCTTTTAGTCCGTTGCCGCTGTTTTAATGGATTCTATGGAGATCTTTGCCAATTTAGTCCTATTACAACTCCAAGCCCAACAATGGATGTTCGTTTAGTTGGAGGCAACGTTCCATATTTCGGTCGTTTGGAAGTTTTTCACAATGGTACATGGGGGACAGTATGTGACGATTCGTGGGATAGGACAGACGGCCTAGTGGTATGTCGCATGTTGGGTTTTCCATCTCTAGTGTCCACAGGCACTGCGCCTATTTCATTGCGTGGTACTGGAAGAATTTGGATGGATGAAGTTAGGTGCAGGGGTTCAGAACGATCGTTAAAGGATTGTCCATTTAATGGTTGGGGAAATCACAACTGTCGCCACACTGAGGATGTTGTCGTGCGCTGCAGTTCCGGGACAACTACAACAGCCAATCCTATTACAACTGGATTGCCTTGCTTTTGCTTTAATGGTGGCTCTCCACAGTGCTTCAGAGGGAGGTTAATACGCTGTAACTGTTTTAATGGCTATTTTGGAAATCGCTGTCAATTCCgtcCTACTACAACTCCAAGCCCTATAACAACTTCACAGCCTCAGATTAGATGCTTTCAATGTAGTGGTTTCCCGGGACAATGCAGACAAACTATTGTAACTTGCCCGCGATCATCTTCTGCATGTTTTTCTGCACGATATACTCTTCGAAGCAACGGCCGTGAAGTTGAAAGTTTCGGTTGTGCTACAAGATCTCAATGTCTCAATCTGTGTGCTAATGCAAAGAGGCAAGGATTGGTAACGAGATGTTCCATGAGCTGTTGTCTCAATAATTTCTGCAATAGGAGAGTTTCGACACCCACGCGAAGGCCAACTACAACACGATCAACAAGACCAAACCAACGACCAACAAcATTTCAAGTAAATACAAGATTCTTTGTGAAACAAGTTTTGAAACTCCTGAAAAGCTACAAGAACATGCTTGATGTGTTTGAGTCATTGCTGAAAGCGTATCTTAAGAGTGATGATGCTCGAGCCGCTAAAAGGGAAGTGGTGTCTATGATGAAAAGGGTCGACGACGCGTCCAGTCAGCTTGGAGAGTCCAACGAACCCGAAGTTCTTCACGCCAAAAGGGATGTTGAAGAGACACGCATACGTGCACAGAAACTCGTCAAGAAACTGGATTCATTCACTGataaCGACCCTTCAAAAGACGTAGAACTTTAGAAAAATGGGACAACGTTGAAATGCACGGAacaatgaataattgaaaacaCACTTTGCACTACTGAATTAATCTCTAAAACAAAGTTAAGTTTCTTGCGAATTAGACCCGACTTTATATACATCAGTATAAAACTCTAAGAAATCCTTTATTGTAAATGTACGTGTACAACATTTGTCATTTCATGTATCTTAAAACCCATTGCTCTAACTGTTACCTATTGTGGCATCTTTGAAGCATTAATTATCGTTCTCTCAGTAGCTGTAAGTAACACTTACACAACTTGCaccattttaaaataaaattttgtttaaactcactttattttactgaaaaaaataaataaactggGATTAACGAAAGTGTGTCCGATTGTGATTACAGCAGAGCACCATAACTAGGAAAAAATGGTAAACTATCGATCTGATTTTCCGGCGACCGACCGCATAACCATGTCGTCCGTAACATCTACGACAGCCCCTAACCATCGCATTTTCGAGCATATGTAAATTCACTTTGTACAACTCAtgcaaaataacaacaatcactgctaacaacaaacaacaacacttTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3EWZ5	MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
B3EWZ6	MAM and LDL-receptor class A domain-containing protein 2 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q6NY73	Galectin-3-binding protein B OS=Danio rerio OX=7955 GN=lgals3bpb PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013272 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00530 all species →	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan
PF00629 all species →	MAM	MAM domain, meprin/A5/mu	Domain	Interproscan
PF00021 all species →	UPAR_LY6	u-PAR/Ly-6 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR045860 all species →	Homologous_superfamily	Snake toxin-like superfamily	Interproscan
IPR001190 all species →	Domain	SRCR domain	Interproscan
IPR036772 all species →	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR017448 all species →	Domain	SRCR-like domain	Interproscan
IPR000998 all species →	Domain	MAM domain	Interproscan
IPR051560 all species →	Family	MAM domain-containing protein	Interproscan
IPR016054 all species →	Domain	Ly-6 antigen/uPA receptor-like	Interproscan
IPR018363 all species →	Conserved_site	CD59 antigen, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23282 all species →	APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000010917.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.