Gene detail

Detailed information of ENSDLIP00000011118.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020910854.2, uncharacterized protein LOC110248655 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000012298

AGTACTAtggattcttttttttttcgaattctGTTAATGAGTATCACGTCACAAATGTAACTTCTGACCTTGGGGTGTCATTCAGCTTTGATATCTCGTTCTATTTGGATGAACATGATGACTGCTGAGCTTTACACAGTGTGAAAAATTAGCATAACACAAGGCAGACAGAGAATGTGGAGgaactcaaaaactaacaactAAAACAACATGCTTTTATCGCAAGCTCACGTCATTTTCACAATCGTTCTTATCTTCATACTCAAGCAATCACTCACCGAAGTTTATGCAGAAGAAAAAGCCATATTTAAGTCGAGAATCGGGAAAGAAAACAGTTGTTTACAAAAGTGCAAACGCCGAAACTTAAACGCGTCCTCAAGTGATGATGAAGCTacaaattgcaacaaaaattGTTCGGTCGAAAGAAGGACAAAAGCGACAACACCGATATCTTCCCTAAATACCAGCCTCGGATGTGGTAAAAAGAGCATGCTCAGACAGCCAATAGGAAACATAACAGATGTTACCGTTCAGTTCAAAGAACGAATTGATAATGATACCAAGATAACTTTGACTGCAAATGTCACATGGAATGTTAGTTTGATCAATTCCAGCATTTATTCCGACGACGATATTTGGTTGGGTTACAACATTCTTTGGTTGAAACAATCAAATATGCATTGTGTTTATGTTGACAAGAATACCACCTGGAAAAGTATCGAGATTGGAAAAAGTCCGTCCGATGCAGAGTTCCGGTTATTTGTTTTGGTTGTGTTCTATCCACCAAGTCTTGCAGAGAAGAGAAAGAAACtgattaattttgtttatccagAGCCTACTCCGAAGTCGCTGccatatttgcaaaaaacaaCAAGTCAGCCCACCAATAACGTCACCACACAGACAGAACCAAATCGGAAAACACCAACAGATGAGCCCGCGAACAGACACTACGTAACTTATGCGGTTGCTGCAGGGGTTTGTCTGGGTGTGGTGATTttaagtttgtttataatattacacgtgaaaaagaaaaagtccACGGCATCCATCTCCTCTCACGAGCCTCTAGAATTCAGCCATGACACGTCTATTATTTTTAGCTCCAGAGATCAAGACTTTATAACCAAAAAACTCATTCCATtcttagaaaaagaaaacaacttcAAATGTTATGTGCATTACCGAGATTGGGAAGTTGGTGAAAATATACATACAAACATCGCTACAGCTATTTACAACTGCAGAAAAATCATCGCTGTAATTTCGAAACACTTTCTCAAAAGCAGATTCTGCATGAGTGAGCTTGATATGGCTTTGGGGCGACTACACTTACACAGAGATTCATCTCTTATTGTTATCAATCTTGGAGTGCCTCCGGAAAGGTTACCTAAATCATTGAGGAGAAGAACGTTTCTTGATTTAACTAGCGTGGAGGAAACAAAGTCTTGGGAAAAGAGGATTGTTAGGCAAATAAGTACCGATGGAAATGGACAACAGATGAGTTATTCGAGTTCTCCGGTAAATAGCGATCACTGTCAGGGAAACACAGAGGTGTCTGAAAATGCTTTTAGTGTTGAGCCAGAGGaagaaaaagatgaagaaagaaaagaggagaaaaagagagagaatCATGGACTACCACAAATAGAAATAGACCTGGATGATAACCCTGATTTGTTTATACAAAACGAAGCCGTAACTAATAGCGGAATTTTGGACAATTTAAGCAAACAATCTGACAACACAAATAGCAACGACGAAGGTTTAGACTGCGATGCTTCCAATGACAAGTGTATGTCAAATAATGACTTCCTGAGCGTTTCTTCTACTAGTACTAGTTCTCTTTCATCTAGTACAAATAACTCACCAAATAATAGCCATTTCAGCTCAGCAAACAACCTTGAAAATGAAGGTGAAAAATGGGCTAGAAGATTTAAAATGCAAATGGAAGTCGAAGCAAGAAACTATTTTAAAGCAAACCAAATGACGGACGCTAAATATCTAGAAGAAGATAGCGTAAATAACAATGCAAATAGGATAGTTTTAGCTAGATTAGGTAGAACCGTACACTCTCATGTTAACGATAGTGCAATCTCATCAAGTGATACTAATGTTGGAATACCTGTGTAGGACCCAAGTAACCAGATGAGTAGACTTTAGAAAAACTACTAATGTGAGGAAGTGAAGGTGAGATTCACCATAAATTTGTTCTCTTACCTCGTGGTCatgttactttttttattattacttttaatttgttattacTTTATAGTAAGTAAATATTGGAAGAAAGGAACATACTTTTGCAGTTGTATATATTCACTGGTAATCAAAGGACGAAAATTTTGGTACATTCGGCACAAGTCGTGAGtagttttttatcaaaacgCGTCATAATCCCCTTGATATCCGTCAACGAGACCCCTTTTTCTAATGCTactctatttttttccaaatcg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60602	Toll-like receptor 5 OS=Homo sapiens OX=9606 GN=TLR5 PE=1 SV=5
Q68Y56	Toll-like receptor 4 OS=Sus scrofa OX=9823 GN=TLR4 PE=2 SV=1
Q9WV82	Toll-like receptor 4 OS=Cricetulus griseus OX=10029 GN=TLR4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000113 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13676 all species →	TIR_2	TIR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000157 all species →	Domain	Toll/interleukin-1 receptor homology (TIR) domain	Interproscan
IPR017241 all species →	Family	Toll-like receptor	Interproscan
IPR035897 all species →	Homologous_superfamily	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24365 all species →	TOLL-LIKE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0001530 all species →	Molecular Function	lipopolysaccharide binding	Interproscan
GO:0001875 all species →	Molecular Function	lipopolysaccharide immune receptor activity	Interproscan
GO:0002224 all species →	Biological Process	toll-like receptor signaling pathway	Interproscan
GO:0002755 all species →	Biological Process	MyD88-dependent toll-like receptor signaling pathway	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006954 all species →	Biological Process	inflammatory response	Interproscan
GO:0006955 all species →	Biological Process	immune response	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0032497 all species →	Biological Process	detection of lipopolysaccharide	Interproscan
GO:0034142 all species →	Biological Process	toll-like receptor 4 signaling pathway	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan
GO:0050829 all species →	Biological Process	defense response to Gram-negative bacterium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000011118.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.