Gene detail

Detailed information of ENSDLIP00000011399.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020895623.1, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000012583

CTCGTCACTTTCCATCGTGTTCTATTGCTGAATAAAACACGACAAAGCCCTTTCTATTTTCCACTGGACTATTATTCGATTGTTCCCTCGTTTATCTTTCGTTCGTTTTGTCGGTTGCATGTTTGAATATTCCAAGATAGCAGTTAAGCAtccatagttttttttaatttttctgtGTATGGTTTGTTAGATTGCAACATAGCAAATCCTATTTTTGATCGGCTTGCTGGGTTGCAGGTACCCAGCAAGCCTGTTATATGCAGGGGACTGGTACTGAggcacaataaaaaaaaaacaagatggcgaCCACAACGTGTCTGATGAATAAGATAATCCAACCAAATTCTGGGCTTTTCAGCTACAGAGGGCTCACAGCATTATGGTCTAAAAGACCAAGTAATTCGAGTTCGTTAAGACGATGTGCTTCATCATTTAGTTTTATTCCAGAGAAAGCCGATCCATCTCTAGGAGAAACCAAGAAGATTAATTTGTTCCAGGCATTGACTAATGCTATGGATATTGCACTGGAAACAGACCCAAGTGCAGtTATCTTTGGTGAAGATGTAGCGTTTGGTGGTGTATTCAGATGCACGGTTGGCCTTAGAGAAAAGCATGGTAAAGATAGAGTATTCAATACCCCACTAAGTGAACAGGGTATAGTTGGTTTTGGTATTGGTCTTGCAGCGGCTGGTGCTACAGCCATAGCTGAGATACAGTTTGCTGACTATATACTACCTGCTTTTGACCAATTAGTGAATGAAGCTGCTAAATTCAGATATCGTTCTGGTAATTTATTTGACTGTGGAGGACTAACTGtgcgggctccctgtggtgcAGTAGGCCATGGGGCACTCTATCATTCACAATCTAATGAAAGCTTCTTTGCTCATGTCCCTGGCCTTAGAGTTGTTATTCCACGTGGTCCTATCCAAGCTAAAGGTCTTCTGCTAGCTTCAATCAGAGATCCCAACCCTGTGATTTTCTTTGAACCCAAAATATTGTACAGACAGTCAGTGGAAGAGGTTCCAGTAGGAGACTATGTACTGCCTTTGTCTCAAGCTGATGTTTTACAAAAAGGTACTGATATAACACTGGTTGGTTGGGGTACTCAAGTCCACGTTCTACGTGAAGTCTGCAAGATAGCACAAGACCAATTAGGAGTCAGCTGTGAACTGATTGATTTACAAACTATTCTACCATGGGACAAAGAAACTATTATTAAGTCTGTACAGAAGACAGGAAGACTGCTAATTGCTCATGAAGCCTGCCATACTGGAGGCTTTGGAGGAGAAATCGCCAGCACTGTGCAGgAGAACTGTTTCCTATCTCTGGAAGCACCTATAATGCGTGTTTGTGGTTGGGACACACCCTTCTCACATATTCACGAACCTTTTTACATGCCAGATAAATGGAGATGCTTTGAGGCCATCAAGAAAATCATggattattaataattaaatattagcACTGTTTCAAACACGCCTTTGCCACACCAACACACGTAGACATATTTTCGAATGAGTTCTTAGGGTTGCCAATCACTTTACACAGGAATCCGAACACTAAAATCATTGTGGGAGAGACTGTTTAACTGGCAGATATTAGAGCAAGGCCAGCGTTTAAAACTCATTCAAGTGAATCATTTGGGGGAATTCAAACGTATGCAGACAAATGCCTCACTTGTATGattattgaaacaaaaacgaTTTTCATTGCAGGCTCAGGCATAACATCTAATGGTTATATAACTCCATTTAGAACACAAAATATCTCTAGAAAATTCAATGTgtcaaattttctttggtgagTTTTAAAGACTTTATTGTAAGCCTTAGAATGAAATGTTTTAGTAAattgaggtatatcttaagcaTGTTCGAAAAAATGCAGCAGCCAAGTTACTAAATGCAAAAGGTAGGAATGTtggcaaattttgttttgcctGGTGCGTATATTATCAACTAATTTTTAGATTTTATAACCGAAGACATGTAGTCAGTAATGAATCATGTTGAGATTTCAATTCAAGCACaaactggaaaaaattaatgtaaaacctagcctcctccgcaggcgtctctttttagcgttttcctttctagtttcttggatgggcttcctgttttgcatttgaccgttggggattatgggattacgtcacGGCCAGGTCTCTCGGTCGAgagagcaacaaaggaatcctgaataagtaaaaaaagcaaaaagggccgaaaaagggttgcctgcggaggaggctatgTAAAACCGAAATATGCAAACTAGATATTGCTCAGTGTGCATGTTGCTTGTATGAGGCGATGTCATTTCTGTTAAAAATGCACCAGGACAAAAAGATCGGACagcctttttttaatcacTAAAATTCCTACATTTCGTGTTCAATAACTTGGTCACATGTTTTTCAAACACCCTTAATATATACCTCATTTGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P35738	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bckdhb PE=1 SV=3
P21839	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos taurus OX=9913 GN=BCKDHB PE=1 SV=2
Q6P3A8	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Bckdhb PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004764 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02780 all species →	Transketolase_C	Transketolase, C-terminal domain	Domain	Interproscan
PF02779 all species →	Transket_pyr	Transketolase, pyrimidine binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009014 all species →	Homologous_superfamily	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II	Interproscan
IPR033248 all species →	Domain	Transketolase, C-terminal domain	Interproscan
IPR005475 all species →	Domain	Transketolase-like, pyrimidine-binding domain	Interproscan
IPR029061 all species →	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42980 all species →	2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005947 all species →	Cellular Component	obsolete mitochondrial alpha-ketoglutarate dehydrogenase complex	Interproscan
GO:0007584 all species →	Biological Process	response to nutrient	Interproscan
GO:0009083 all species →	Biological Process	branched-chain amino acid catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00167	BCKDHB, bkdA2; 2-oxoisovalerate dehydrogenase E1 component subunit beta	EC:1.2.4.4	Lipoic acid metabolism	ko00785	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.