Gene detail

Detailed information of ENSDLIP00000011672.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_028515682.1, uncharacterized protein LOC110241747 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000012857

ATGTACGGCATTactctctctttctcttttGCTCTAAGCTTGACAAGAGTCACAGCCTATATTCCCAGACCTACTGGACTTcaagtacaaaaaataaatctaactaCTGCAGTAGCCCTCTGGGACCCAATCCCCAAACAACACGTACCGGGTGTACTACTTGGATATAATGTGAGACTCTACGATGATTTCACTGGGAACTTGGAAACTTTTTGGCAAACGAGCGAGACCTCTGTTGTGTTGAGATATCTCAAAGATTGGTTAAGGTATGGGATACGCGTTGGAGGTTATACTGTCAACGAAACTGGCCTTAATACATATTTGTACTTCGAAACACcTACCATTCAACGTCCTCATGGTTTATTGGCAACCAAAATCAATGTCAGTACTTTGGAAGTTCAATGGGCCCCAATACAAAGAGATGATATACTGGGATACAAAATACAATTGCGAGATGGTTATACCCTATTACAATTACACAAAACAAATGAGAATAAGACTATCATAGGTCATCTTCCATTCAGAAAGAATGTATACCTGCTCATTCAGGGTTTCACAAGCAATGACACAAGCCAAGCGGCATACACACCTGTTTACTTGTATCCAATACCGGAAGTTTCTGCTCTGAAATTGGTTGTAAATGGAACTACAGCAGTCGGTACATGGGACCCGATCCCAGATAAATTTGTCTTTGGTAAACTTCTTGGATATAGAGTAAATCTGTTCCTATACGGCAGTGGCTATGTTAacttttttgaaacaaatatcACTACCATCGTTATAAGCGATCTCCTACATGTGTCCGTTTACAACATATATGTATTTGGTTATACTGCCAATGAAACGGGGAGAGTAACATATAGTAATAGAGTTACCACTGGATGCGGAGGTTTCATAAGAAATCAGCTGAATGGTAATATCAAGATAACAAGTAATGGTTTATCGTTTAGAGACGTCAATTGTATATGGATCATTGAAGGAGATAATTCCAAGTCGTTGACTTTGATAAAAGTTGAAACAATACGTTTCTGGTCTTTCAACTGCAGGGAACGCTATTTAAGAATCAGCGATGGTCAAGGCCAACCTCTTACAACTTTATGTCAAACAAGCCGATCTCTAACCGTTGCTACATTTGGTTCTGTTAAGATAGAGGTGTTTTGGCGACGATGGTTATGGCGCCCTTTTGAAATGACACTTTCCTATTTTATATTCCCTAGAGGCATAGAAAATGCTCCCGTGAAAGATTCCTGGAGTATATCCGCAAACAGTAATAGCACATCATCCATCTCCGTCAACTGGAACCCATACACTGGCCAAGAAATAGTCAAAAACTTTATTGCCGTATGTACCGCTCAAAACAACCAGAGCAGTATATTTACAGCTTCGACTAGCGTTAACCAATCCACTGTAATCGTTACAAACCTTCTCAAGAACACAGAATATAAAGTTGAAGTAGTGGCTTTCTTGGAAACAACTTTGAATGCTTCTGACTGGAATGACACGAGTTTAAAAACGACTGCCTGGAAGAGTCAGTGGCTGATCACAAGAACATTAGAAGATGTTCCAAGCAAACCTCCCGATAACGTCAAAGCAGTCAGTTCTGGACCAACAAGTATTCTTGTCAGTTGGAACAGTCTGGTCGACACTAATGGTGTTATCGTTGGCTACAATGTATATTATCGGAAGGCACACCAGGGACTGAACTCTTCTGTCATGGTTCGCGTACTTGCCAACAagacaaaaattcaaattaagaATCTGCGGCAGGCTACAGAGTACAAGATAAGCGTATCAGCTCTGACACGTGTAGGGGAGGGACCAAGTCGTAGTGTGTACGTCACAACAGGCTTCTATCAAACACTGACAAAACTTTCAGGGAAATTCAGCTCTCCAAATTATCCCAAGAAATATCCCAGTTCAGCTGACTACACATGGGAAATAGCACAAGGCAGAGCATTTGATCAACTGTTTATCATGCTCTGGGCATTTGATCTTGAGGAAGGACTTTATAATTTCTGCAGtgaCTTTGTAAAGATAATAGACAATAAAGGCAACCAGTTATTGCTGACCTGTGGTCGAAAAAGCCCGTTTGCTGTTGTAGCAACAAGATCTGCCACCATAAAACTTCAGTCTGACAAGGGAGTAGAAAAGAGTGGATTTACAGCAACATATTTTACTCTTCATAACATTGACAGAGTGATCAGCGTGAAGAAAAGTGGCGTGACAACCACTGAAGTTTCCATCCAATGGAATAACCAAAGAGGATATGGTCGAGGATTGTTCACGATATTCTTCAGGAAACACGAATCACAAGAAACCTGGAAGTTTACTGTAGCTAACAATACATATGCAACCATTAGTGGTCTACAGCCTTCTACTCAGTATGAACTGCTGGTTACTGGAAACGATAACTTGACAAGTTATGGAAGCAACTCGATAACGTTTGTCACACAAAGCTCTCCAACACTACGTCCTACAGAACCTACCGAATCCATTACGCTGATGTATGAGTATGGCCTCAAAGCAGGCGATCAAGTAATTCCTAATTATTGGTATTTCCATTATTACTGCAAGAAAGTTCCCTTAAACGAAAATGGCTTTCTTTTAATGACTGAACGACACAGTGACGTTTATaTTTGCCGTAATGGTATACTACGATTTGAGAGTCCTTATTATGTTCACTGGCCAGTTTATCTCGGCAGCACAAAGCAATCTTGTCAACTGAAAATACTGGCTCCATATTGGTGCCTGGCTGATAGATATCAGTCGACGGTTTATTACCATGTTTATCAAACATCAGATAATTCAGTTAAGTCTAATAAGGTCTTAAAACAAGCtacaagtgacgtcatcaaactCCACAAGGAAGCTTTACCTGCTTCCTTCAAAGCATCATGGGTACTAGTGGTGACATGGGACAATTTACTTCATTCCACGCAGAACGCAGAG

Transcript

ENSDLIT00000012857

ATAATACACTTCGCTGTGCTAGCTAGTGACTGTTTTCAACGATGTACGGCATTactctctctttctcttttGCTCTAAGCTTGACAAGAGTCACAGCCTATATTCCCAGACCTACTGGACTTcaagtacaaaaaataaatctaactaCTGCAGTAGCCCTCTGGGACCCAATCCCCAAACAACACGTACCGGGTGTACTACTTGGATATAATGTGAGACTCTACGATGATTTCACTGGGAACTTGGAAACTTTTTGGCAAACGAGCGAGACCTCTGTTGTGTTGAGATATCTCAAAGATTGGTTAAGGTATGGGATACGCGTTGGAGGTTATACTGTCAACGAAACTGGCCTTAATACATATTTGTACTTCGAAACACcTACCATTCAACGTCCTCATGGTTTATTGGCAACCAAAATCAATGTCAGTACTTTGGAAGTTCAATGGGCCCCAATACAAAGAGATGATATACTGGGATACAAAATACAATTGCGAGATGGTTATACCCTATTACAATTACACAAAACAAATGAGAATAAGACTATCATAGGTCATCTTCCATTCAGAAAGAATGTATACCTGCTCATTCAGGGTTTCACAAGCAATGACACAAGCCAAGCGGCATACACACCTGTTTACTTGTATCCAATACCGGAAGTTTCTGCTCTGAAATTGGTTGTAAATGGAACTACAGCAGTCGGTACATGGGACCCGATCCCAGATAAATTTGTCTTTGGTAAACTTCTTGGATATAGAGTAAATCTGTTCCTATACGGCAGTGGCTATGTTAacttttttgaaacaaatatcACTACCATCGTTATAAGCGATCTCCTACATGTGTCCGTTTACAACATATATGTATTTGGTTATACTGCCAATGAAACGGGGAGAGTAACATATAGTAATAGAGTTACCACTGGATGCGGAGGTTTCATAAGAAATCAGCTGAATGGTAATATCAAGATAACAAGTAATGGTTTATCGTTTAGAGACGTCAATTGTATATGGATCATTGAAGGAGATAATTCCAAGTCGTTGACTTTGATAAAAGTTGAAACAATACGTTTCTGGTCTTTCAACTGCAGGGAACGCTATTTAAGAATCAGCGATGGTCAAGGCCAACCTCTTACAACTTTATGTCAAACAAGCCGATCTCTAACCGTTGCTACATTTGGTTCTGTTAAGATAGAGGTGTTTTGGCGACGATGGTTATGGCGCCCTTTTGAAATGACACTTTCCTATTTTATATTCCCTAGAGGCATAGAAAATGCTCCCGTGAAAGATTCCTGGAGTATATCCGCAAACAGTAATAGCACATCATCCATCTCCGTCAACTGGAACCCATACACTGGCCAAGAAATAGTCAAAAACTTTATTGCCGTATGTACCGCTCAAAACAACCAGAGCAGTATATTTACAGCTTCGACTAGCGTTAACCAATCCACTGTAATCGTTACAAACCTTCTCAAGAACACAGAATATAAAGTTGAAGTAGTGGCTTTCTTGGAAACAACTTTGAATGCTTCTGACTGGAATGACACGAGTTTAAAAACGACTGCCTGGAAGAGTCAGTGGCTGATCACAAGAACATTAGAAGATGTTCCAAGCAAACCTCCCGATAACGTCAAAGCAGTCAGTTCTGGACCAACAAGTATTCTTGTCAGTTGGAACAGTCTGGTCGACACTAATGGTGTTATCGTTGGCTACAATGTATATTATCGGAAGGCACACCAGGGACTGAACTCTTCTGTCATGGTTCGCGTACTTGCCAACAagacaaaaattcaaattaagaATCTGCGGCAGGCTACAGAGTACAAGATAAGCGTATCAGCTCTGACACGTGTAGGGGAGGGACCAAGTCGTAGTGTGTACGTCACAACAGGCTTCTATCAAACACTGACAAAACTTTCAGGGAAATTCAGCTCTCCAAATTATCCCAAGAAATATCCCAGTTCAGCTGACTACACATGGGAAATAGCACAAGGCAGAGCATTTGATCAACTGTTTATCATGCTCTGGGCATTTGATCTTGAGGAAGGACTTTATAATTTCTGCAGtgaCTTTGTAAAGATAATAGACAATAAAGGCAACCAGTTATTGCTGACCTGTGGTCGAAAAAGCCCGTTTGCTGTTGTAGCAACAAGATCTGCCACCATAAAACTTCAGTCTGACAAGGGAGTAGAAAAGAGTGGATTTACAGCAACATATTTTACTCTTCATAACATTGACAGAGTGATCAGCGTGAAGAAAAGTGGCGTGACAACCACTGAAGTTTCCATCCAATGGAATAACCAAAGAGGATATGGTCGAGGATTGTTCACGATATTCTTCAGGAAACACGAATCACAAGAAACCTGGAAGTTTACTGTAGCTAACAATACATATGCAACCATTAGTGGTCTACAGCCTTCTACTCAGTATGAACTGCTGGTTACTGGAAACGATAACTTGACAAGTTATGGAAGCAACTCGATAACGTTTGTCACACAAAGCTCTCCAACACTACGTCCTACAGAACCTACCGAATCCATTACGCTGATGTATGAGTATGGCCTCAAAGCAGGCGATCAAGTAATTCCTAATTATTGGTATTTCCATTATTACTGCAAGAAAGTTCCCTTAAACGAAAATGGCTTTCTTTTAATGACTGAACGACACAGTGACGTTTATaTTTGCCGTAATGGTATACTACGATTTGAGAGTCCTTATTATGTTCACTGGCCAGTTTATCTCGGCAGCACAAAGCAATCTTGTCAACTGAAAATACTGGCTCCATATTGGTGCCTGGCTGATAGATATCAGTCGACGGTTTATTACCATGTTTATCAAACATCAGATAATTCAGTTAAGTCTAATAAGGTCTTAAAACAAGCtacaagtgacgtcatcaaactCCACAAGGAAGCTTTACCTGCTTCCTTCAAAGCATCATGGGTACTAGTGGTGACATGGGACAATTTACTTCATTCCACGCAGAACGCAGAGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60469	Cell adhesion molecule DSCAM OS=Homo sapiens OX=9606 GN=DSCAM PE=1 SV=2
Q9ERC8	Cell adhesion molecule DSCAM OS=Mus musculus OX=10090 GN=Dscam PE=1 SV=1
Q8VHZ8	Cell adhesion molecule DSCAM OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0015413 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06119 all species →	NIDO	Nidogen-like	Family	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR003886 all species →	Domain	NIDO domain	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050991 all species →	Family	Extracellular Matrix Regulatory Proteins	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46708 all species →	TENASCIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007160 all species →	Biological Process	cell-matrix adhesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000011672.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.