Gene detail

Detailed information of ENSDLIP00000012770.1 in Diadumene lineata

Genomic Location: chr15:10283955...10299000
NR annotation: XP_020912165.1, runt-related transcription factor 3 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PF39	Runt-related transcription factor 1 OS=Xenopus laevis OX=8355 GN=runx1 PE=2 SV=2
Q01196	Runt-related transcription factor 1 OS=Homo sapiens OX=9606 GN=RUNX1 PE=1 SV=3
Q13950	Runt-related transcription factor 2 OS=Homo sapiens OX=9606 GN=RUNX2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005959 (this species only) · gene tree & orthology
Transcription factor family	Runt · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00853 all species →	Runt	Runt domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013524 all species →	Domain	Runt domain	Interproscan
IPR000040 all species →	Family	Acute myeloid leukemia 1 protein (AML1)/Runt	Interproscan
IPR008967 all species →	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR012346 all species →	Homologous_superfamily	p53/RUNT-type transcription factor, DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11950 all species →	RUNT RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0001503 all species →	Biological Process	ossification	Interproscan
GO:0002062 all species →	Biological Process	chondrocyte differentiation	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030097 all species →	Biological Process	hemopoiesis	Interproscan
GO:0030182 all species →	Biological Process	neuron differentiation	Interproscan
GO:0045595 all species →	Biological Process	regulation of cell differentiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000012770.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.