Gene detail

Detailed information of ENSDLIP00000013159.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020908249.1, protein Spindly [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000014450

ATGGACAAAGATCAAGAAGATTTACTTAAAGAGTTTTACCAACTGAAGGAGGAGAACAAATTACTCAATGAAGAGAAGGAGAGTTTATACCGTGATCGCGAGTTGGCAGGAGAACTTGGCAAGACTTTGCTGCAACAGAACAAGGAACTGGAGGCCAAACTCGACGAGATGCAAACAGAACATCATGACATTATCATGAAAATGGAGgACTTGAAGCAGGAGAATTACACCATTAAATCAAGACTTGAAACTGAGACAAAATCAAAAGACCACCATCTTGATGAGATAGAAAACACGAAGGAAAATCTCCACAAAGAGTTTGAACAAGAACGTATGATGACACAAATTACCAACGATAAAAAACTTAAGGAATTACGAAAGGAAATAACTTCATTACAATCGGAAATCGAAAAACATACCATGATGGAAGGGcaatacaaagaaaagataCAACAGCAAGATGAAATACTAGAGAAAACTCGCCAGTATCACAAACAACTCCAGTTAGCTGAACACCTTGAGACAGACTTGGAAGAACAGAAACAACTCACTACAGAATTACAAACTGAACGAGACTGCTTACTGATGGAGATAACACagttgaaaaatattcaagagCAACAGGCATTTGACAAGAAAGTTGTTGAAGAGAAATTTCAAGAAATAGAAGAAGAGCTCCAAGAAAAGAATCGCCAGTCACAAATGTGGTATAATTGCTTACAGGAAGCCAGACAAGAATCTGGAGAATTCAAAGCAGAGTTAGACATGCTGAAGGCAGCAATGGCAAGCAAGGACTTTAAAAATAAGGGCAACTCACTTTTTGGAGAGGTGGAAGATAGGAGGGTAGAGCTGGAGAAGAAATATCTAAGCTTGAAGACACAACACGAGTGTCTGGTAAAGACACATACTGTTACAAAACAACATCTTCACAAGCTTAAGAACCAAGTTGCTGCCCTGCTCCAAGTGAAGGGAAATTCTGCTGATGTATCTCACATGCAAAGGCTCCAACAAGAATGTGCCCGAAAAGAAGGTGAATTAAAAATGCTGGTCGACAAAGTCAGAATTCTGGAGAAAAAACAGacAGACAACAGTTACACGTCTCGTATGAAGGAATTCCATGAAGCTTTTTCTGACTTTGGCGACAAAAAAGACTATATTAACTTCCTTGAGATTCTTCTCCAAGATGAAAAAAAGAAAATAGCAGAGATGCAGAAAGAGATAGAGACAAAAACTCTCCTTCAGTTGATTGAAAGTGACAGAGTCAGAAATACAGAAACACAGCTCTACAAAGCTGAAAGTAACACAGAGAAACTCAAGGCAGAAAATATGAAGCTAAGGTTGAAAATAGAGGATATGAAGATGAAACTTCAACAAGCAAAAAGTTCCAATGAACAAAGACCAACTAACCAAGGCCTTGCTAAAAGTAAATCAACCTCAGCTAttcaaaaaaaagttattgtgAAACGAGTAACTCCACCAAGTGATAAAACATCACCAAAAGAAGTGCACTCAACAGTCATAAACACATCAAAAAACGCCACTAAAGATGGGTCCACAGTAAACTTAAGTGAAAAAACTATTGATTCAAAGCAAAGCAACAAATTGAGTGATATCTCTCACAGCACAGAAAATAACAACCAGCCAAGTGACGACTTGCAGAAGACATACACAGATGACAGCAATCCAGAATTGGCTTCAAACAATTTAACAGCCAAAGAGCCAAAAGGGAGTGGCATGTCCAACACAACTTGTGACCAAAGCTTATTTAGAGAAATCTCAGCAGCAGAGAATACACAACCACAATTTGAAAGTCTCTCAGATGAACTACCAAAAATGGGTTGTCACCAAGATGAACCTAGCAGCAATAGTGAACAGGAAAAAAGAGTTAGGTTTAAAGAAAAGTCTCCAGAtattgttgctgttgatgACAGCTCGCAAGAAACGAAAGAAAATAGAGAGCCTCTAAGAACTGTGAATGAACAAGATCCAAGCAATGCAAAAACAAGCTCTACCAAATCAATGGGTGGAGTGACATTAAAAGGACAAAGACAACCAACAAAAGTTATTAATGTTGGAAAAggaacaaaaaatgaatgccCACAACAATAG

Transcript

ENSDLIT00000014450

taattaatatcgTATCGTTTCCTAAActcaaacaaaatatcaaataaaactaaaagatGTTAAGTTTATGAAGAATTAAATACTTTTTCTTGGTAGAAAGAAAAGATTTAGTTTTCCTCCGAAAAAAGAAGCTTTTAGTTTGGGCTTTCTGTGATTAATTTTATAGAGCTCTCATTGGCTAACGATAGCAGCCAATcataatcaaaatttcaacaatGAACGAAGTTTGAATTTCACTCGTGAAGATTCCTTGGAGAAAAGTTCAAATTCTAATATCTTTTCCCGTCTTTCAGAAGAACATGGACAAAGATCAAGAAGATTTACTTAAAGAGTTTTACCAACTGAAGGAGGAGAACAAATTACTCAATGAAGAGAAGGAGAGTTTATACCGTGATCGCGAGTTGGCAGGAGAACTTGGCAAGACTTTGCTGCAACAGAACAAGGAACTGGAGGCCAAACTCGACGAGATGCAAACAGAACATCATGACATTATCATGAAAATGGAGgACTTGAAGCAGGAGAATTACACCATTAAATCAAGACTTGAAACTGAGACAAAATCAAAAGACCACCATCTTGATGAGATAGAAAACACGAAGGAAAATCTCCACAAAGAGTTTGAACAAGAACGTATGATGACACAAATTACCAACGATAAAAAACTTAAGGAATTACGAAAGGAAATAACTTCATTACAATCGGAAATCGAAAAACATACCATGATGGAAGGGcaatacaaagaaaagataCAACAGCAAGATGAAATACTAGAGAAAACTCGCCAGTATCACAAACAACTCCAGTTAGCTGAACACCTTGAGACAGACTTGGAAGAACAGAAACAACTCACTACAGAATTACAAACTGAACGAGACTGCTTACTGATGGAGATAACACagttgaaaaatattcaagagCAACAGGCATTTGACAAGAAAGTTGTTGAAGAGAAATTTCAAGAAATAGAAGAAGAGCTCCAAGAAAAGAATCGCCAGTCACAAATGTGGTATAATTGCTTACAGGAAGCCAGACAAGAATCTGGAGAATTCAAAGCAGAGTTAGACATGCTGAAGGCAGCAATGGCAAGCAAGGACTTTAAAAATAAGGGCAACTCACTTTTTGGAGAGGTGGAAGATAGGAGGGTAGAGCTGGAGAAGAAATATCTAAGCTTGAAGACACAACACGAGTGTCTGGTAAAGACACATACTGTTACAAAACAACATCTTCACAAGCTTAAGAACCAAGTTGCTGCCCTGCTCCAAGTGAAGGGAAATTCTGCTGATGTATCTCACATGCAAAGGCTCCAACAAGAATGTGCCCGAAAAGAAGGTGAATTAAAAATGCTGGTCGACAAAGTCAGAATTCTGGAGAAAAAACAGacAGACAACAGTTACACGTCTCGTATGAAGGAATTCCATGAAGCTTTTTCTGACTTTGGCGACAAAAAAGACTATATTAACTTCCTTGAGATTCTTCTCCAAGATGAAAAAAAGAAAATAGCAGAGATGCAGAAAGAGATAGAGACAAAAACTCTCCTTCAGTTGATTGAAAGTGACAGAGTCAGAAATACAGAAACACAGCTCTACAAAGCTGAAAGTAACACAGAGAAACTCAAGGCAGAAAATATGAAGCTAAGGTTGAAAATAGAGGATATGAAGATGAAACTTCAACAAGCAAAAAGTTCCAATGAACAAAGACCAACTAACCAAGGCCTTGCTAAAAGTAAATCAACCTCAGCTAttcaaaaaaaagttattgtgAAACGAGTAACTCCACCAAGTGATAAAACATCACCAAAAGAAGTGCACTCAACAGTCATAAACACATCAAAAAACGCCACTAAAGATGGGTCCACAGTAAACTTAAGTGAAAAAACTATTGATTCAAAGCAAAGCAACAAATTGAGTGATATCTCTCACAGCACAGAAAATAACAACCAGCCAAGTGACGACTTGCAGAAGACATACACAGATGACAGCAATCCAGAATTGGCTTCAAACAATTTAACAGCCAAAGAGCCAAAAGGGAGTGGCATGTCCAACACAACTTGTGACCAAAGCTTATTTAGAGAAATCTCAGCAGCAGAGAATACACAACCACAATTTGAAAGTCTCTCAGATGAACTACCAAAAATGGGTTGTCACCAAGATGAACCTAGCAGCAATAGTGAACAGGAAAAAAGAGTTAGGTTTAAAGAAAAGTCTCCAGAtattgttgctgttgatgACAGCTCGCAAGAAACGAAAGAAAATAGAGAGCCTCTAAGAACTGTGAATGAACAAGATCCAAGCAATGCAAAAACAAGCTCTACCAAATCAATGGGTGGAGTGACATTAAAAGGACAAAGACAACCAACAAAAGTTATTAATGTTGGAAAAggaacaaaaaatgaatgccCACAACAATAGACACATTGATCAAATTAAATACTAGCAATCACATTACAGCTACAATGGTTGTATCATAACCagcaatcttggacataaatgttgagactctgagCACTCTTATACgtttcttgagtatgtttgctgtaatacatcactttgacggtctttcaattatcccccttccccccaaaagcaatgttgtgttctctgaaggtgtttctctgccatgaataacaacattgatcgagggagggggagggagggtcagatattgatgtgtacagtcatgaaactatgcaaaatttgaagagtctcaactatttatgtccaagattgagGCCcttttgcaactttgactgtTTGCTTTGCTTTTCTGCGACTACATCAACCATCAATCCACCGAGGCAGCATCATTGATGTCAcagaggaaaaaaacaaatccagtcaaagttgcaaatgCATCTGGTCGGAATGCAatgattttagctgtaaaaaaAGGCTTTGAAAGATGAACCTAATCTCAAACAGTCTGCCATGTTCCTAATGTCCAGACCAAAATACTCAAAGTctaattttatattaaacaaatataaacatatgTATTAAACAGTCATGTTTTATTACTAGCCATTCTAATCACATTGTATTATTcttattgtaaaataatttattagtcATAAACTGTTGGCACACTATTATACATTTATCCTGAACACACTGATTTACATATAAAAGAAGTAGtaaaatcatattatttttgtaatgcATCACAATACCATATACTAAACCAATAATTCATTTCCATCTACATACTGTTAGAGCATATTACAAACAATTATTAAGTTGACACAGAAGCACTATCTTATACAGACCACAAATACTAGCTACATTTCTTTTGCATgtaacaaaaattaaattgtcgttgaaaattgaaataaacatgtttataTACAAAATGTGTGATATCATGCACCTCTTAGAATGATTCAATAAGTCCTGTTTCCTCTTTGATCGGGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3DLE8	Protein Spindly OS=Xenopus tropicalis OX=8364 GN=spdl1 PE=2 SV=1
Q5BIX7	Protein Spindly-A OS=Xenopus laevis OX=8355 GN=spdl1-a PE=2 SV=1
Q6NRW2	Protein Spindly-B OS=Xenopus laevis OX=8355 GN=spdl1-b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007338 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSDLIP00000013159.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR051149 all species →	Family	Spindly/BICDR Dynein Motor Adapter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32123 all species →	BICD FAMILY-LIKE CARGO ADAPTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000132 all species →	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0000940 all species →	Cellular Component	outer kinetochore	Interproscan
GO:0007080 all species →	Biological Process	mitotic metaphase chromosome alignment	Interproscan
GO:0034501 all species →	Biological Process	protein localization to kinetochore	Interproscan
GO:0043515 all species →	Molecular Function	kinetochore binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26098	SPDL1; protein Spindly	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.